RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NRIP1P48552 1158 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 IL18R1Q13478 541 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 RFTN2Q52LD8 501 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PHC2Q8IXK0 858 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ZNF675Q8TD23 568 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ST8SIA2Q92186 375 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ISG20Q96AZ6 181 aaKnown RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ASB2Q96Q27 587 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 VN1R3Q9BXE9 311 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 SYTL2Q9HCH5 934 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 BPIFA1Q9NP55 256 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ZNF490Q9ULM2 529 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 KNL1Q8NG31 2342 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 HMX3A6NHT5 357 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 WWP2O00308 870 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ARHGEF9O43307 516 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 WDR47O94967 919 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PKLRP30613 574 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ETV3P41162 512 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PPP3CCP48454 512 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 SMSP52788 366 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 UGT2B15P54855 530 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PRKCDQ05655 676 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 TSTQ16762 297 aaKnown RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PLEKHM3Q6ZWE6 761 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 APH1BQ8WW43 257 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 SLC9A7Q96T83 725 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 SEMA3CQ99985 751 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 C11orf54Q9H0W9 315 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 KRT84Q9NSB2 600 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 MAN2B2Q9Y2E5 1009 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ARL5AQ9Y689 179 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ELOVL7A1L3X0 281 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ANKRD28O15084 1053 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 FCER2P06734 321 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ADORA3P0DMS8 318 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 CSF2RAP15509 400 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 GKP32189 559 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 SCAPQ12770 1279 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ZNF549Q6P9A3 640 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 IDO2Q6ZQW0 420 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 CNTN4Q8IWV2 1026 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 EFHBQ8N7U6 833 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ZNF548Q8NEK5 533 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 NLGN4YQ8NFZ3 816 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 RIT1Q92963 219 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PEX13Q92968 403 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 SERPINB11Q96P15 392 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 C17orf62Q9BQA9 187 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 ACTL8Q9H568 366 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 FAM124BQ9H5Z6 455 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 IL1RAPQ9NPH3 570 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 RCOR3Q9P2K3 495 aaPredicted RBP15.72■□□□□ 0.11
CCDC8-201ENST00000307522 PCDHGB1Q9Y5G3 927 aa15.72■□□□□ 0.11
CCDC8-201ENST00000307522 CLDN24A6NM45 220 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 AREL1O15033 823 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 CCL5P13501 91 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 POU2F1P14859 743 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 PAMP19021 973 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 AQP1P29972 269 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 HOXA9P31269 272 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 DMC1Q14565 340 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 SPANXN4Q5MJ08 99 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 OR52J3Q8NH60 311 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 PXYLP1Q8TE99 480 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 UTP15Q8TED0 518 aaKnown RBP15.71■□□□□ 0.11
CCDC8-201ENST00000307522 MTFMTQ96DP5 389 aaKnown RBP15.71■□□□□ 0.11
CCDC8-201ENST00000307522 L3HYPDHQ96EM0 354 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 C1QTNF7Q9BXJ2 289 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 SLC25A37Q9NYZ2 338 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 ZFP37Q9Y6Q3 630 aaPredicted RBP15.71■□□□□ 0.11
CCDC8-201ENST00000307522 UPK3BL1B0FP48 263 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 UPK3BL2E5RIL1 263 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 TEX46H3BTG2 121 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 PRRG1O14668 218 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 CREG1O75629 220 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 RPL38P63173 70 aaKnown RBP15.71■□□□□ 0.11
CCDC8-201ENST00000307522 LCP2Q13094 533 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 MARC1Q5VT66 337 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 CPZQ66K79 652 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 TXNDC8Q6A555 127 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 TMC8Q8IU68 726 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 ENTHD1Q8IYW4 607 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 SETD9Q8NE22 299 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 TOR1AIP2Q8NFQ8 470 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 TRMOQ9BU70 441 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 SCML1Q9UN30 329 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 PCDHGC4Q9Y5F7 938 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 PEX16Q9Y5Y5 336 aa15.71■□□□□ 0.11
CCDC8-201ENST00000307522 RALGAPA2Q2PPJ7 1873 aa15.71■□□□□ 0.1
CCDC8-201ENST00000307522 SLC16A6O15403 523 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 SNX4O95219 450 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 TYMPP19971 482 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 RPS3P23396 243 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC8-201ENST00000307522 RGRP47804 291 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 HMGCS1Q01581 520 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 PAQR3Q6TCH7 311 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 TPGS1Q6ZTW0 290 aa15.7■□□□□ 0.1
CCDC8-201ENST00000307522 ZFAND4Q86XD8 727 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms