RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 KLF10Q13118 480 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PUM1Q14671 1186 aaKnown RBP eCLIP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 HIPK1Q86Z02 1210 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 OR4F6Q8NGB9 312 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 OR4K14Q8NGD5 310 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 DERL2Q9GZP9 239 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 UBE2ZQ9H832 354 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TBC1D17Q9HA65 648 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 CHMP1AQ9HD42 196 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 MYO18AQ92614 2054 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PLIN3O60664 434 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 BCL10O95999 233 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 EPOP01588 193 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 MAOBP27338 520 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 SPINT3P49223 89 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 RPS15AP62244 130 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TLR1Q15399 786 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 CARTPTQ16568 116 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TMPRSS11AQ6ZMR5 421 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PQLC3Q8N755 202 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC35B2Q8TB61 432 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 IMP4Q96G21 291 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 RTP3Q9BQQ7 232 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 KLF16Q9BXK1 252 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 OR51V1Q9H2C8 321 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PRPF19Q9UMS4 504 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 ZFR2Q9UPR6 939 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TNFAIP8O95379 198 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 POU2F1P14859 743 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 CDH12P55289 794 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 HSF2Q03933 536 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 KCNC3Q14003 757 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 HERC3Q15034 1050 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF311Q5JNZ3 666 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TSPAN33Q86UF1 283 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TMEM189-UBE2V1I3L0A0 370 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 GSC2O15499 205 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PROS1P07225 676 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 HSD11B1P28845 292 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 IDH3AP50213 366 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 GDI2P50395 445 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 DSTNP60981 165 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 NFE2L1Q14494 772 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TIMM50Q3ZCQ8 353 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 OR52E4Q8NGH9 312 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 POU2F3Q9UKI9 436 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 E7EQ34 232 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF208O43345 1280 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 BCHEP06276 602 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 HNRNPH1P31943 449 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 CORO7P57737 925 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 DSC1Q08554 894 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 CYP1B1Q16678 543 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 ACSBG2Q5FVE4 666 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 SATL1Q86VE3 508 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 NATD1Q8N6N6 113 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 SHKBP1Q8TBC3 707 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 MTG2Q9H4K7 406 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 TAS2R9Q9NYW1 312 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 GALPQ9UBC7 116 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 BCAT2O15382 392 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 PSMG1O95456 288 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 ACADLP28330 430 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 FOXK1P85037 733 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 SLAMF1Q13291 335 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 MTX3Q5HYI7 312 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 CXorf57Q6NSI4 855 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 UMODL1-AS1Q8N2C9 162 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 PARP8Q8N3A8 854 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 OR6K6Q8NGW6 343 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 GATA5Q9BWX5 397 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 EPB41L1Q9H4G0 881 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 TMEM59LQ9UK28 342 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 ARHGEF33A8MVX0 844 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 CXorf49A8MYA2 514 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 AKAP8O43823 692 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 KCNC1P48547 511 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 MTPNP58546 118 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 GANABQ14697 944 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC9B1Q4ZJI4 515 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 EGFLAMQ63HQ2 1017 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 PACS2Q86VP3 889 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 C3orf58Q8NDZ4 430 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 TSGA13Q96PP4 275 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 KCNC2Q96PR1 638 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF304Q9HCX3 659 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 ACTL7AQ9Y615 435 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 KIAA0355O15063 1070 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 CCNB2O95067 398 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 PBX2P40425 430 aa10.37□□□□□ -0.75
SYNPO2-201ENST00000307142 TRIM25Q14258 630 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms