RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SMUG1Q53HV7 270 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 RRM2BQ7LG56 351 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SERPINA9Q86WD7 417 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 GALNT13Q8IUC8 556 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 GPR151Q8TDV0 419 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TRIB2Q92519 343 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ATG10Q9H0Y0 220 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 UCKL1Q9NWZ5 548 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SPATA2Q9UM82 520 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PCDHB1Q9Y5F3 818 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SPO11Q9Y5K1 396 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PTGESO14684 152 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SSX4O60224 188 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 CACNG3O60359 315 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TNFRSF1BP20333 461 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 CXCR2P25025 360 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 BMPR1AP36894 532 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 USP30Q70CQ3 517 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SNX20Q7Z614 316 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 RBFAQ8N0V3 343 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 CYP4Z2PQ8N1L4 340 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SIMC1Q8NDZ2 872 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 GGHQ92820 318 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 CLIP3Q96DZ5 547 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 DIABLOQ9NR28 239 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 GPRC5BQ9NZH0 403 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF624Q9P2J8 865 aaPredicted RBP12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ERVW-1Q9UQF0 538 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ACTL7AQ9Y615 435 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 RBBP6Q7Z6E9 1792 aaKnown RBP12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ARL5CA6NH57 179 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 HMX3A6NHT5 357 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 PCP4L1A6NKN8 68 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 NT5C1B-RDH14C9J2C7 533 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 AP3D1O14617 1153 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 PTHP01270 115 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GSTM1P09488 218 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 UQCRC1P31930 480 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 RPL9P32969 192 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ITGA1P56199 1179 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CPTPQ5TA50 214 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SLC46A3Q7Z3Q1 461 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GALNT7Q86SF2 657 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 DEDD2Q8WXF8 326 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 IGSF8Q969P0 613 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ZNF419Q96HQ0 510 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CAMKK2Q96RR4 588 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CDADC1Q9BWV3 514 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TPT1P8Q9HAU6 139 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 MAT2BQ9NZL9 334 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TLR6Q9Y2C9 796 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CMAHPQ9Y471 501 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 MANSC4A6NHS7 340 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GPR39O43194 453 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CDK1P06493 297 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 PRKCAP17252 672 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 JUNDP17535 347 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 UGT2B10P36537 528 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SPDYE7PQ495Y7 208 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 VARS2Q5ST30 1063 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SLX4IPQ5VYV7 408 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SLC5A8Q8N695 610 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 UCK2Q9BZX2 261 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 FAM83DQ9H4H8 585 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 VNN3Q9NY84 501 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 KIAA1522Q9P206 1035 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SOCS7O14512 581 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 KPNA5O15131 536 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 EPOP01588 193 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ATXN1LP0C7T5 689 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TALDO1P37837 337 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GPR15P49685 360 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GPAT3Q53EU6 434 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 IFI44LQ53G44 452 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 NXNL2Q5VZ03 156 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 MBOAT1Q6ZNC8 495 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ENTHD1Q8IYW4 607 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CARNMT1Q8N4J0 409 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ZBTB2Q8N680 514 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 GPR150Q8NGU9 434 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CD200R1Q8TD46 325 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 AP3S1Q92572 193 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 PEX13Q92968 403 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 TP53INP1Q96A56 240 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 MTERF1Q99551 399 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 ANKRA2Q9H9E1 313 aa12.64□□□□□ -0.39
TRIM35-201ENST00000305364 CCDC59Q9P031 241 aaKnown RBP12.64□□□□□ -0.39
TRIM35-201ENST00000305364 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms