RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 LIPJQ5W064 366 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 GRHL2Q6ISB3 625 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 AGR3Q8TD06 166 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 KLHL6Q8WZ60 621 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 SLC41A2Q96JW4 573 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 AIF1LQ9BQI0 150 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 FOXA1P55317 472 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 CYP4F3Q08477 520 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 KCNAB1Q14722 419 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 CPSF6Q16630 551 aaKnown RBP eCLIP26.02■■□□□ 1.76
HDAC3-201ENST00000305264 GGTA1PQ4G0N0 100 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 CDYL2Q8N8U2 506 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 GRAMD1AQ96CP6 724 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 EML4Q9HC35 981 aaKnown RBP26.02■■□□□ 1.76
HDAC3-201ENST00000305264 TRPS1Q9UHF7 1281 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 BTRCQ9Y297 605 aa26.02■■□□□ 1.76
HDAC3-201ENST00000305264 HCRTR1O43613 425 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 JUPP14923 745 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 MLLT3P42568 568 aaPredicted RBP26.01■■□□□ 1.75
HDAC3-201ENST00000305264 HSD11B2P80365 405 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 DEFB110Q30KQ9 67 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 HES3Q5TGS1 186 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 ADNP2Q6IQ32 1131 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 TCTN2Q96GX1 697 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 RTKNQ9BST9 563 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 THAP1Q9NVV9 213 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 PILRAQ9UKJ1 303 aa26.01■■□□□ 1.75
HDAC3-201ENST00000305264 FFAR3O14843 346 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 GPR42O15529 346 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 CDK4P11802 303 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 EZRP15311 586 aaKnown RBP26■■□□□ 1.75
HDAC3-201ENST00000305264 NELFEP18615 380 aaKnown RBP26■■□□□ 1.75
HDAC3-201ENST00000305264 BCL6P41182 706 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 HNF4AP41235 474 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 INHBCP55103 352 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 OCRLQ01968 901 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 RNF44Q7L0R7 432 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 KMT5CQ86Y97 462 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 SLCO1B3Q9NPD5 702 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 KIF26BQ2KJY2 2108 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 DCDC2BA2VCK2 349 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 TMEM233B4DJY2 109 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 LCMT2O60294 686 aaKnown RBP26■■□□□ 1.75
HDAC3-201ENST00000305264 CAPN1P07384 714 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 GRK3P35626 688 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 C16orf72Q14CZ0 275 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 PAGE2BQ5JRK9 111 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 TCHHL1Q5QJ38 904 aaPredicted RBP26■■□□□ 1.75
HDAC3-201ENST00000305264 SH2D4BQ5SQS7 431 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 CLEC6AQ6EIG7 209 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 FBXO42Q6P3S6 717 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 ZNF781Q8N8C0 355 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 PDE7BQ9NP56 450 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 ZDHHC2Q9UIJ5 367 aa26■■□□□ 1.75
HDAC3-201ENST00000305264 ZNF490Q9ULM2 529 aaPredicted RBP26■■□□□ 1.75
HDAC3-201ENST00000305264 A0A0J9YVX5 310 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 OR1F1O43749 312 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 MT-CO3P00414 261 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 HGFP14210 728 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 CCKBRP32239 447 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 ARL4DP49703 201 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 TRA2AQ13595 282 aaKnown RBP eCLIP25.99■■□□□ 1.75
HDAC3-201ENST00000305264 ZRSR2Q15696 482 aaKnown RBP25.99■■□□□ 1.75
HDAC3-201ENST00000305264 TMIGD1Q6UXZ0 262 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 RGS9BPQ6ZS82 235 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 KRT78Q8N1N4 520 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 D2HGDHQ8N465 521 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 ANKRD53Q8N9V6 530 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 TMEM74Q96NL1 305 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 ZFYVE21Q9BQ24 234 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 FIS1Q9Y3D6 152 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 TIMM22Q9Y584 194 aa25.99■■□□□ 1.75
HDAC3-201ENST00000305264 TRBC2A0A5B9 178 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 CXCR2P25025 360 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 LAPTM5Q13571 262 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 RBBP5Q15291 538 aaKnown RBP25.98■■□□□ 1.75
HDAC3-201ENST00000305264 FRMPD2BQ6IN97 320 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.98■■□□□ 1.75
HDAC3-201ENST00000305264 SARGQ9BW04 601 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 CHRNA10Q9GZZ6 450 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 ENO1P06733 434 aaKnown RBP25.98■■□□□ 1.75
HDAC3-201ENST00000305264 GABRA4P48169 554 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 ISXQ2M1V0 245 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 MED27Q6P2C8 311 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 DNAJC22Q8N4W6 341 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 METTL6Q8TCB7 284 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 RAP2CQ9Y3L5 183 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 PCDHGA4Q9Y5G9 962 aa25.98■■□□□ 1.75
HDAC3-201ENST00000305264 TCP11X1B4DZS4 312 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 H0YIV9 168 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 CSO75390 466 aaKnown RBP25.97■■□□□ 1.75
HDAC3-201ENST00000305264 SDHBP21912 280 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 SCTRP47872 440 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 RPS15AP62244 130 aaKnown RBP25.97■■□□□ 1.75
HDAC3-201ENST00000305264 FAM47EQ6ZV65 393 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 LAS2Q8IYD9 372 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 OR7G3Q8NG95 312 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 OR2A5Q96R48 311 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 CCDC134Q9H6E4 229 aa25.97■■□□□ 1.75
HDAC3-201ENST00000305264 CLCA2Q9UQC9 943 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms