RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 RICTORQ6R327 1708 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ANKRD66B4E2M5 251 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 SAP18O00422 153 aaKnown RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 GNRH1P01148 92 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 UNC50Q53HI1 259 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 NUDT13Q86X67 352 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 SLC15A4Q8N697 577 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 FBXO27Q8NI29 283 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 C1orf216Q8TAB5 229 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 DNAJA4Q8WW22 397 aaPredicted RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 GTPBP2Q9BX10 602 aaKnown RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ARMC1Q9NVT9 282 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ASB3Q9Y575 518 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 MAU2Q9Y6X3 613 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 A0A096LPI6 279 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 A0A0G2JPF8 293 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 CAPN14A8MX76 684 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 HNRNPCL3B7ZW38 293 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 USP2O75604 605 aaPredicted RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ARL6IP5O75915 188 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 BCHEP06276 602 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 HNRNPCL4P0DMR1 293 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 KCNE1P15382 129 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ERP29P30040 261 aaKnown RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PPP3R1P63098 170 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 CLCA4Q14CN2 919 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 LYSMD3Q7Z3D4 306 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 RTP4Q96DX8 246 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 GPER1Q99527 375 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ITM2CQ9NQX7 267 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF69Q9UC07 566 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 NUP50Q9UKX7 468 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 MGAT4BQ9UQ53 548 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PEX10O60683 326 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 SLC19A2O60779 497 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 EPOP01588 193 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PRKCGP05129 697 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 CD2P06729 351 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 GIMD1P0DJR0 217 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 HSD17B2P37059 387 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 RBM34P42696 430 aaKnown RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 SERINC3Q13530 473 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 NCEH1Q6PIU2 408 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 AKAP1Q92667 903 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ACDQ96AP0 544 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 CST11Q9H112 138 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 MAGIXQ9H6Y5 334 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PCDHGB6Q9Y5F9 930 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 MT-ND2P03891 347 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 GDF5P43026 501 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 AVPR1BP47901 424 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PPP5CP53041 499 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 C4orf46Q504U0 113 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 MEDAGQ5VYS4 303 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 NAPRTQ6XQN6 538 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PARGQ86W56 976 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CMTR2Q8IYT2 770 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 NXPE1Q8N323 547 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PEX13Q92968 403 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 FIZ1Q96SL8 496 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 NSUN3Q9H649 340 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 INMT-MINDY4F8WBC2 141 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 NRP1O14786 923 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 IL7P13232 177 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 RPS3P23396 243 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ACVRL1P37023 503 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PLA2G16P53816 162 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 RBBP4Q09028 425 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 SLC10A2Q12908 348 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 HNRNPA0Q13151 305 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CCBE1Q6UXH8 406 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF598Q86UK7 904 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CHCHD4Q8N4Q1 142 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ZSWIM3Q96MP5 696 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PTPN18Q99952 460 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 TMEM246Q9BRR3 403 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 HERPUD2Q9BSE4 406 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 NDC1Q9BTX1 674 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 SMURF1Q9HCE7 757 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 TMEM248Q9NWD8 314 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 EOMESO95936 686 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 TGFB1P01137 390 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF3P17036 446 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 FUT4P22083 530 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 MPIP34949 423 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CBX5P45973 191 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 RPS24P62847 133 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 UBXN11Q5T124 520 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ADGRD2Q7Z7M1 963 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PHC2Q8IXK0 858 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms