RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 IGLV3-12A0A075B6K2 115 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 ALPPP05187 535 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 ANXA5P08758 320 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 GSTA2P09210 222 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 ZGLP1P0C6A0 271 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 SSTR1P30872 391 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 SLC12A2P55011 1212 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 AIMP2Q13155 320 aaKnown RBP25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 FAM53BQ14153 422 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 RBBP7Q16576 425 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 VWA5B1Q5TIE3 1220 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 TMEM207Q6UWW9 146 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 CYS1Q717R9 158 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 TMEM151BQ8IW70 566 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 OR56A3Q8NH54 315 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 MMABQ96EY8 250 aaPredicted RBP25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 FAM129AQ9BZQ8 928 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 C5AR2Q9P296 337 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 FBXL4Q9UKA2 621 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 HS3ST3B1Q9Y662 390 aa25.16■■□□□ 1.62
CDKN2A-201ENST00000304494 NPPBP16860 134 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 PLTPP55058 493 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 SOX8P57073 446 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 TAS2R39P59534 338 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 CSNK1G2P78368 415 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 KLC1Q07866 573 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 RAPSNQ13702 412 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 MYBPC3Q14896 1274 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 COLEC12Q5KU26 742 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 SBSNQ6UWP8 590 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 ARHGEF39Q8N4T4 335 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 MCMBPQ9BTE3 642 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 C14orf105Q9NVL8 296 aa25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 SPENQ96T58 3664 aaKnown RBP25.15■■□□□ 1.62
CDKN2A-201ENST00000304494 SOCS6O14544 535 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 P2RX6O15547 441 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 IPO13O94829 963 aaKnown RBP25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 GUCA1CO95843 209 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 CDH1P12830 882 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 SLC26A3P40879 764 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 POU4F1Q01851 419 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 C3orf62Q6ZUJ4 267 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 YIPF2Q9BWQ6 316 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 GPAMQ9HCL2 828 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 MKKSQ9NPJ1 570 aaPredicted RBP25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 SMYD2Q9NRG4 433 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 TRPC4Q9UBN4 977 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 SH2B3Q9UQQ2 575 aa25.14■■□□□ 1.62
CDKN2A-201ENST00000304494 HEATR5BQ9P2D3 2071 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 A0A0A6YYC8 382 aaPredicted RBP25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 TCRBV9S1A1TA0A576 114 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 I3L1I5 382 aaPredicted RBP25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 AVPR1BP47901 424 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 FOXK1P85037 733 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 ZNF460Q14592 562 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 PPP1R3AQ16821 1122 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 TUBB8Q3ZCM7 444 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 KIRREL2Q6UWL6 708 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 CAMKVQ8NCB2 501 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 FBXO25Q8TCJ0 367 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 PYCR2Q96C36 320 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 TSPAN17Q96FV3 270 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 C16orf45Q96MC5 204 aaPredicted RBP25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 CPNE1Q99829 537 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 C3orf18Q9UK00 162 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 MAP4K5Q9Y4K4 846 aa25.13■■□□□ 1.61
CDKN2A-201ENST00000304494 MED13Q9UHV7 2174 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 CCDC88CQ9P219 2028 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 FOXS1O43638 330 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 ZIC2O95409 532 aaPredicted RBP25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 CCR8P51685 355 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 ZXDCQ2QGD7 858 aaPredicted RBP25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 NADK2Q4G0N4 442 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 VWA2Q5GFL6 755 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 VN1R4Q7Z5H5 301 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 ADAMTSL2Q86TH1 951 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 CEP97Q8IW35 865 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 PRSS58Q8IYP2 241 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 TBC1D19Q8N5T2 526 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 AMER3Q8N944 861 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 ABHD11Q8NFV4 315 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 TGIF2Q9GZN2 237 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 IKZF3Q9UKT9 509 aa25.12■■□□□ 1.61
CDKN2A-201ENST00000304494 TNRC6AQ8NDV7 1962 aaKnown RBP25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 FEZF1A0PJY2 475 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 NPEPPSL1A6NEC2 478 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 FAM159BA6NKW6 160 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 CXorf49A8MYA2 514 aaPredicted RBP25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 H0YIG0 161 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 CDC7O00311 574 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 PIAS1O75925 651 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 ITGA3P26006 1051 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 CDKL1Q00532 357 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 IRAK1BP1Q5VVH5 260 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 C8orf74Q6P047 294 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 ASPGQ86U10 573 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 CCDC25Q86WR0 208 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 OR11G2Q8NGC1 345 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 TM9SF4Q92544 642 aa25.11■■□□□ 1.61
CDKN2A-201ENST00000304494 OR4K3Q96R72 315 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms