RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ATP6V1HQ9UI12 483 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 ZNF639Q9UID6 485 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 COL4A2P08572 1712 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 CXCR6O00574 342 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 PRSS23O95084 383 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 LRATO95237 230 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 ANXA4P09525 319 aaPredicted RBP18.71■□□□□ 0.59
HOXC4-201ENST00000303406 ZCCHC18P0CG32 403 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 SERPINB1P30740 379 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 CTHP32929 405 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 SEC13P55735 322 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 DLX2Q07687 328 aaPredicted RBP18.71■□□□□ 0.59
HOXC4-201ENST00000303406 GTDC1Q4AE62 458 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 DNAJC14Q6Y2X3 702 aaPredicted RBP18.71■□□□□ 0.59
HOXC4-201ENST00000303406 FAM129CQ86XR2 697 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 BDH2Q9BUT1 245 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 CHID1Q9BWS9 393 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 SPATA9Q9BWV2 254 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 PIF1Q9H611 641 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 MAGIXQ9H6Y5 334 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 NT5DC2Q9H857 520 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 FZD4Q9ULV1 537 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 SH2B3Q9UQQ2 575 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 SLC17A4Q9Y2C5 497 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 TRPM6Q9BX84 2022 aa18.71■□□□□ 0.59
HOXC4-201ENST00000303406 EIF4E1BA6NMX2 242 aaKnown RBP18.7■□□□□ 0.58
HOXC4-201ENST00000303406 EVPLLA8MZ36 301 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 RNGTTO60942 597 aaKnown RBP18.7■□□□□ 0.58
HOXC4-201ENST00000303406 RASAL1O95294 804 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 HOXC4P09017 264 aaPredicted RBP18.7■□□□□ 0.58
HOXC4-201ENST00000303406 SLC35G4P0C7Q5 338 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 CKMT2P17540 419 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 PPIBP23284 216 aaKnown RBP18.7■□□□□ 0.58
HOXC4-201ENST00000303406 CXCR2P25025 360 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 CHRNB3Q05901 458 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 SFSWAPQ12872 951 aaKnown RBP18.7■□□□□ 0.58
HOXC4-201ENST00000303406 KIAA1211LQ6NV74 962 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 ERICH5Q6P6B1 374 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 HORMAD1Q86X24 394 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 EPHX4Q8IUS5 362 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 PGBD3Q8N328 593 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 METTL4Q8N3J2 472 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 RAB42Q8N4Z0 105 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 VPS37AQ8NEZ2 397 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 SPDYE1Q8NFV5 336 aaPredicted RBP18.7■□□□□ 0.58
HOXC4-201ENST00000303406 SMPDL3AQ92484 453 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 DUSP26Q9BV47 211 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 SLC17A9Q9BYT1 436 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 RHBGQ9H310 441 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 CXorf56Q9H5V9 222 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 ZNF696Q9H7X3 374 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 WASH6PQ9NQA3 447 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 SLC6A13Q9NSD5 602 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 PRKAB1Q9Y478 270 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 TRANK1O15050 2925 aa18.7■□□□□ 0.58
HOXC4-201ENST00000303406 A0A1W2PQU0 124 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PRR19A6NJB7 356 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 SOCS2O14508 198 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 FPGTO14772 594 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ACOX3O15254 700 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PCDH7O60245 1069 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 DEAF1O75398 565 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PAK4O96013 591 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 DRD1P21728 446 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CDKN2CP42773 168 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MRPS21P82921 87 aaKnown RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ZNF763Q0D2J5 394 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 COL19A1Q14993 1142 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 NRF1Q16656 503 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 NHSL2Q5HYW2 709 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 C6orf52Q5T4I8 152 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CPTPQ5TA50 214 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 USP30Q70CQ3 517 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 GPR155Q7Z3F1 870 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CARM1Q86X55 608 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CACUL1Q86Y37 369 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 IL17RCQ8NAC3 791 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 OR7A2PQ8NGA2 310 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 FIG4Q92562 907 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MIEF2Q96C03 454 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 ERLEC1Q96DZ1 483 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MTERF3Q96E29 417 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MENTQ9BUN1 341 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 BHLHE41Q9C0J9 482 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 FAM192AQ9GZU8 254 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 MKRN2Q9H000 416 aaKnown RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 C8orf33Q9H7E9 229 aaPredicted RBP18.69■□□□□ 0.58
HOXC4-201ENST00000303406 UBAP1Q9NZ09 502 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 A0A1W2PQF6 199 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 SAC3D1A6NKF1 404 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 CLOCKO15516 846 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 TPST1O60507 370 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 SEMA3DO95025 777 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 EPN2O95208 641 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 TNFAIP8O95379 198 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 FAM58BPP0C7Q3 252 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 HOXB2P14652 356 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 GPX2P18283 190 aa18.69■□□□□ 0.58
HOXC4-201ENST00000303406 IDSP22304 550 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms