RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SERHLQ9NQF3 203 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 A0A1W2PQ72 361 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 C17orf102A2RUQ5 167 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 DDNO94850 711 aaPredicted RBP14.21□□□□□ -0.13
COL6A2-201ENST00000300527 ALX3O95076 343 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 CCNYL3P0C7X3 344 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 ACPPP15309 386 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 UGT2B10P36537 528 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 GLCCI1Q86VQ1 547 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 TEX26Q8N6G2 289 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 KCNJ9Q92806 393 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 SDHCQ99643 169 aaPredicted RBP14.21□□□□□ -0.13
COL6A2-201ENST00000300527 C1QTNF3Q9BXJ4 246 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 ARL15Q9NXU5 204 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 VPS9D1Q9Y2B5 631 aa14.21□□□□□ -0.13
COL6A2-201ENST00000300527 WNT9AO14904 365 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 INSIG1O15503 277 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 SUV39H1O43463 412 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 ESR1P03372 595 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 HTR7P34969 479 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 CCL23P55773 120 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 WDR45BQ5MNZ6 344 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 MON1AQ86VX9 555 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 NLRP8Q86W28 1048 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 SLC34A3Q8N130 599 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 B3GNT7Q8NFL0 401 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 NELL1Q92832 810 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 COL21A1Q96P44 957 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 OR2A14Q96R47 310 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 COPS8Q99627 209 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 TM6SF2Q9BZW4 377 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 PCDHB5Q9Y5E4 795 aa14.21□□□□□ -0.14
COL6A2-201ENST00000300527 F5H5T6 163 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 IRF1P10914 325 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TSTA3Q13630 321 aaPredicted RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TBCEQ15813 527 aaPredicted RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 NADSYN1Q6IA69 706 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 ZSWIM9Q86XI8 627 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 SNAPC3Q92966 411 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TMCO6Q96DC7 493 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 NIPSNAP1Q9BPW8 284 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TINF2Q9BSI4 451 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 ASB8Q9H765 288 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 C11orf16Q9NQ32 467 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CCL27Q9Y4X3 112 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 HSPE1-MOB4S4R3N1 261 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TSC2P49815 1807 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 ERVH48-1M5A8F1 160 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 SCO2O43819 266 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TNFRSF21O75509 655 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CYP2A7P20853 494 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 FEN1P39748 380 aaKnown RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 IL12RB1P42701 662 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CLCN7P51798 805 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 DSC3Q14574 896 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PCBP2Q15366 365 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PARP15Q460N3 678 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 EIF3MQ7L2H7 374 aaKnown RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 NOXA1Q86UR1 476 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 SERPINA9Q86WD7 417 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 OR5H6Q8NGV6 325 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 SH3KBP1Q96B97 665 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CCSER2Q9H7U1 834 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TMEM39AQ9NV64 488 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PRSS21Q9Y6M0 314 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PLXNA1Q9UIW2 1896 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 YES1P07947 543 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 SDC1P18827 310 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 POLR2EP19388 210 aaKnown RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CRATP43155 626 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 MRPL19P49406 292 aaKnown RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CYP4F8P98187 520 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 HOXC5Q00444 222 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TAF10Q12962 218 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PYDC2Q56P42 97 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PDZK1Q5T2W1 519 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 ARTNQ5T4W7 220 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CALHM3Q86XJ0 350 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 SLC38A6Q8IZM9 456 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 LGI4Q8N135 537 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 ATG10Q9H0Y0 220 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 ZNF556Q9HAH1 456 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CRNNQ9UBG3 495 aaPredicted RBP14.2□□□□□ -0.14
COL6A2-201ENST00000300527 PRELID1Q9Y255 219 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 CFL2Q9Y281 166 aa14.2□□□□□ -0.14
COL6A2-201ENST00000300527 TRAV19A0A0A6YYK7 116 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 MAGEB17A8MXT2 336 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ARHGAP33O14559 1287 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 CXCL11O14625 94 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 STK16O75716 305 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ATXN7L2Q5T6C5 722 aaPredicted RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 SLX4IPQ5VYV7 408 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 GPR65Q8IYL9 337 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ENKURQ8TC29 256 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 VPS35Q96QK1 796 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 ZNF717Q9BY31 904 aaPredicted RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 CD244Q9BZW8 370 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 OLA1Q9NTK5 396 aaKnown RBP14.19□□□□□ -0.14
COL6A2-201ENST00000300527 DHRS7Q9Y394 339 aa14.19□□□□□ -0.14
COL6A2-201ENST00000300527 CLCA3PQ9Y6N3 262 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms