RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 AMER3Q8N944 861 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 DNAJB14Q8TBM8 379 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 CERS2Q96G23 380 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 LMF1Q96S06 567 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 PPANQ9NQ55 473 aaKnown RBP13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 ADAMTS6Q9UKP5 1117 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 PDE10AQ9Y233 779 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 PCDHGA10Q9Y5H3 936 aa13.19□□□□□ -0.3
TMEM41B-201ENST00000299596 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 A0A0A6YYC8 382 aaPredicted RBP13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 NSG1A0A0A6YYJ2 146 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 A0A1W2PQ72 361 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 I3L1I5 382 aaPredicted RBP13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 CBX6O95503 412 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 HEXBP07686 556 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 FDXRP22570 491 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 AVPR1BP47901 424 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 IL2P60568 153 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 TBPL1P62380 186 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 Q0VFX4 171 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 MRPL49Q13405 166 aaKnown RBP13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 NR6A1Q15406 480 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 HIF1AQ16665 826 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 AGTRAPQ6RW13 159 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 PLD3Q8IV08 490 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 PRR7Q8TB68 274 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 SSC4DQ8WTU2 575 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 LRRC39Q96DD0 335 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 BARD1Q99728 777 aaKnown RBP13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 FAM129AQ9BZQ8 928 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 AGPAT4Q9NRZ5 378 aa13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 CORO1CQ9ULV4 474 aaPredicted RBP13.18□□□□□ -0.3
TMEM41B-201ENST00000299596 PABPN1LA6NDY0 278 aaKnown RBP13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 H0YIG0 161 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 P2RX6O15547 441 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 SEMA7AO75326 666 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 BANF1O75531 89 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 COX6A1P12074 109 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 GRK3P35626 688 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 TSFMP43897 325 aaKnown RBP13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 CDKN2DP55273 166 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 DR1Q01658 176 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 MFAP5Q13361 173 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 TLR1Q15399 786 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 RBM20Q5T481 1227 aaKnown RBP13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 B3GNTL1Q67FW5 361 aaPredicted RBP13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 C17orf64Q86WR6 236 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 IGDCC3Q8IVU1 814 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 CAMKVQ8NCB2 501 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 LINGO1Q96FE5 620 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 MESP1Q9BRJ9 268 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 TRIM54Q9BYV2 358 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 NOVA2Q9UNW9 492 aaKnown RBP13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 VWA7Q9Y334 891 aa13.17□□□□□ -0.3
TMEM41B-201ENST00000299596 IGHV1-45A0A0A0MS14 117 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 FFAR3O14843 346 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 GPR42O15529 346 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 NSA2O95478 260 aaKnown RBP13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 DDAH2O95865 285 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 SERPINA7P05543 415 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 PRR35P0CG20 571 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 ICAM2P13598 275 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 ELK3P41970 407 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 AP1S2P56377 157 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 GNG11P61952 73 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 AP2B1P63010 937 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 CSNK1G2P78368 415 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 NAE1Q13564 534 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 ZNF169Q14929 603 aaPredicted RBP13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 CAPN13Q6MZZ7 669 aaPredicted RBP13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 LCTLQ6UWM7 567 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 LINC00696Q6ZRV3 163 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 VN1R4Q7Z5H5 301 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 CREG2Q8IUH2 290 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 KLHL7Q8IXQ5 586 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 CAPZA3Q96KX2 299 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 HAUS8Q9BT25 410 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 SGPP1Q9BX95 441 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 ATG10Q9H0Y0 220 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 RIC8BQ9NVN3 520 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 MKL2Q9ULH7 1088 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 CSAG2Q9Y5P2 127 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 PCM1Q15154 2024 aa13.16□□□□□ -0.3
TMEM41B-201ENST00000299596 SHANK1Q9Y566 2161 aa13.15□□□□□ -0.3
TMEM41B-201ENST00000299596 LOC102723996A0A087X1L8 192 aa13.15□□□□□ -0.3
TMEM41B-201ENST00000299596 KLHL18O94889 574 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms