RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 MBOAT4Q96T53 435 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 PKP4Q99569 1192 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 LHPPQ9H008 270 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 OR2AG1Q9H205 316 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 RAD21L1Q9H4I0 556 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 RAPGEFL1Q9UHV5 662 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 PCDHB11Q9Y5F2 797 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 XPNPEP2O43895 674 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 HSD3B1P14060 373 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SYN1P17600 705 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 HSD3B2P26439 372 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 GBX1Q14549 363 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 CPZQ66K79 652 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SHQ1Q6PI26 577 aaKnown RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 CRTC3Q6UUV7 619 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 CNIH3Q8TBE1 160 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 IL1RAPQ9NPH3 570 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 ATAD3AQ9NVI7 634 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 INSL6Q9Y581 213 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 TRIM64A6NGJ6 449 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SLC1A7O00341 560 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 FPR1P21462 350 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 MATN1P21941 496 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 GSTM2P28161 218 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 PDHA2P29803 388 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SOAT1P35610 550 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 GSSP48637 474 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 IL18R1Q13478 541 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 LIPIQ6XZB0 460 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 P3H2Q8IVL5 708 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 TTC29Q8NA56 475 aaPredicted RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 OR13F1Q8NGS4 319 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 ERLEC1Q96DZ1 483 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 HSPBAP1Q96EW2 488 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 LRIG1Q96JA1 1093 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 PSME2Q9UL46 239 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.31
CDH8-201ENST00000299345 PSIP1O75475 530 aaKnown RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 PRNPP04156 253 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 FMO3P31513 532 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 CASP9P55211 416 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 RAPSNQ13702 412 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 PLPP6Q8IY26 295 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 OTUB2Q96DC9 234 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 GBF1Q92538 1859 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 H0Y858 1186 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 SAP18O00422 153 aaKnown RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 SCAMP2O15127 329 aaKnown RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 MAN1A2O60476 641 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 FAM20BO75063 409 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 KCNK5O95279 499 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 GBAP04062 536 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 CD22P20273 847 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 CHI3L1P36222 383 aaPredicted RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 SLBPQ14493 270 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDH8-201ENST00000299345 TMEM215Q68D42 235 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 DPPA4Q7L190 304 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 ZC3H7AQ8IWR0 971 aaKnown RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 OR8J2Q8NGG1 315 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 POF1BQ8WVV4 589 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 SGCDQ92629 289 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 RASSF1Q9NS23 344 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 H0YIV9 168 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 M0R3G1 203 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 SGTAO43765 313 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 TGFB1P01137 390 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 ACPPP15309 386 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 IL1RNP18510 177 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 PSMB9P28065 219 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 MTAPQ13126 283 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 EIF3MQ7L2H7 374 aaKnown RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
CDH8-201ENST00000299345 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 OR4K1Q8NGD4 311 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 NEIL2Q969S2 332 aa13.14□□□□□ -0.31
CDH8-201ENST00000299345 GABRR3A8MPY1 467 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 TMX2-CTNND1H3BSU7 103 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CPNE6O95741 557 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 GPX2P18283 190 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 IMPA1P29218 277 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 PRLHRP49683 370 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
CDH8-201ENST00000299345 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
CDH8-201ENST00000299345 DGCR6Q14129 220 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms