RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 OTOL1A6NHN0 477 aaPredicted RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 AQP12BA6NM10 295 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 hCG_2039718K7EN88 272 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 TAF4O00268 1085 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 GFRA2O00451 464 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 RFXANKO14593 260 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 LATO43561 262 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 MOSPD3O75425 235 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 NADKO95544 446 aaPredicted RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ANXA6P08133 673 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 TIMP2P16035 220 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 MLLT3P42568 568 aaPredicted RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 RPS9P46781 194 aaKnown RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 IFITM2Q01629 132 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 SLC14A1Q13336 389 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 MADCAM1Q13477 382 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 NKG7Q16617 165 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 MMAAQ8IVH4 418 aaKnown RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 AQP12AQ8IXF9 295 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 CPXM2Q8N436 756 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ABHD11Q8NFV4 315 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ZFP90Q8TF47 636 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 CHPT1Q8WUD6 406 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 SNX19Q92543 992 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ZNF583Q96ND8 569 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 PANX1Q96RD7 426 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 C1QTNF3Q9BXJ4 246 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 PADI4Q9UM07 663 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ARHGEF33A8MVX0 844 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 SLC28A1O00337 649 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 AREL1O15033 823 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 B3GALNT1O75752 331 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 FKBP9O95302 570 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 LATS1O95835 1130 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 SERPINA1P01009 418 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 COX7A2P14406 83 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 RPS3P23396 243 aaKnown RBP eCLIP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 RFC2P35250 354 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 HNF4AP41235 474 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 COPZ1P61923 177 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 TUBA4AP68366 448 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 PWP1Q13610 501 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 DHCR24Q15392 516 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 HKDC1Q2TB90 917 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 FKBP9P1Q75LS8 142 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 NECAB2Q7Z6G3 386 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 ANKRD13BQ86YJ7 626 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 GATAD2AQ86YP4 633 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 CCDC103Q8IW40 242 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 RASGEF1AQ8N9B8 481 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 HCAR2Q8TDS4 363 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 PDLIM5Q96HC4 596 aaKnown RBP9.78□□□□□ -0.84
FOXN4-201ENST00000299162 TPD52L3Q96J77 140 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 C9orf16Q9BUW7 83 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 DNAJC11Q9NVH1 559 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 IL36AQ9UHA7 158 aa9.78□□□□□ -0.84
FOXN4-201ENST00000299162 TRBV5-4A0A0C4DH59 114 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 ANKRD28O15084 1053 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 HS6ST1O60243 411 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 EBLN1P0CF75 366 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 PSMD8P48556 350 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 CYP4F2P78329 520 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 FAM98BQ52LJ0 330 aaKnown RBP9.77□□□□□ -0.84
FOXN4-201ENST00000299162 C7orf61Q8IZ16 206 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 ASZ1Q8WWH4 475 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 SMG7Q92540 1137 aaKnown RBP9.77□□□□□ -0.84
FOXN4-201ENST00000299162 DACH2Q96NX9 599 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 HEBP1Q9NRV9 189 aa9.77□□□□□ -0.84
FOXN4-201ENST00000299162 ELOVL7A1L3X0 281 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 TBC1D3BA6NDS4 549 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 CLDN25C9JDP6 229 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 PRRT4C9JH25 899 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 TULP3O75386 442 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 SDC1P18827 310 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 MRPS15P82914 257 aaKnown RBP9.77□□□□□ -0.85
FOXN4-201ENST00000299162 TMEM115Q12893 351 aaPredicted RBP9.77□□□□□ -0.85
FOXN4-201ENST00000299162 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.77□□□□□ -0.85
FOXN4-201ENST00000299162 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 CATSPEREQ5SY80 951 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 FRG2Q64ET8 278 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 PPP4R4Q6NUP7 873 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 PARS2Q7L3T8 475 aaKnown RBP9.77□□□□□ -0.85
FOXN4-201ENST00000299162 NETO1Q8TDF5 533 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 ASB11Q8WXH4 323 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 MAL2Q969L2 176 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 ZUFSPQ96AP4 578 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 FRG2BQ96QU4 278 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 REXO4Q9GZR2 422 aaKnown RBP9.77□□□□□ -0.85
FOXN4-201ENST00000299162 SGK2Q9HBY8 427 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 CCDC177Q9NQR7 707 aaPredicted RBP9.77□□□□□ -0.85
FOXN4-201ENST00000299162 BAG5Q9UL15 447 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 PPT2Q9UMR5 302 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 SNX6Q9UNH7 406 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 MAGEB17A8MXT2 336 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 CXCR6O00574 342 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 TGFB1P01137 390 aa9.77□□□□□ -0.85
FOXN4-201ENST00000299162 BMP2P12643 396 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms