RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 FAIM2Q9BWQ8 316 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 MRPS7Q9Y2R9 242 aaKnown RBP13.05□□□□□ -0.32
RBM47-201ENST00000295971 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 WNT9AO14904 365 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 CLTBP09497 229 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 SHMT2P34897 504 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 FEN1P39748 380 aaKnown RBP13.05□□□□□ -0.32
RBM47-201ENST00000295971 OPRL1P41146 370 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 ITGA1P56199 1179 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 ANKDD1AQ495B1 522 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 CTSL3PQ5NE16 218 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 TPRG1LQ5T0D9 272 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 MANEALQ5VSG8 457 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 ZBTB8BQ8NAP8 495 aaPredicted RBP13.05□□□□□ -0.32
RBM47-201ENST00000295971 TRUB1Q8WWH5 349 aaKnown RBP13.05□□□□□ -0.32
RBM47-201ENST00000295971 RHBDF1Q96CC6 855 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 PPP1R16AQ96I34 528 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 POLR2J2Q9GZM3 115 aaKnown RBP13.05□□□□□ -0.32
RBM47-201ENST00000295971 FAIMQ9NVQ4 179 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 ITGB1BP2Q9UKP3 347 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 ATAD5Q96QE3 1844 aa13.05□□□□□ -0.32
RBM47-201ENST00000295971 PTSQ03393 145 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 CBX2Q14781 532 aaPredicted RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 IQCCQ4KMZ1 466 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 C9orf64Q5T6V5 341 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 NIPAL1Q6NVV3 410 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TMPRSS11AQ6ZMR5 421 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 GALNT7Q86SF2 657 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 MAL2Q969L2 176 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TADA1Q96BN2 335 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 DIRAS2Q96HU8 199 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 GPRC5BQ9NZH0 403 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TRBC2A0A5B9 178 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 NME6O75414 186 aaPredicted RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 TNFRSF21O75509 655 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 SOX14O95416 240 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 IL12RB1P42701 662 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 APOFQ13790 326 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TEX26Q8N6G2 289 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TEX47Q8TBZ9 253 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 ART5Q96L15 291 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 POLR2J3Q9H1A7 115 aaKnown RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 INSL5Q9Y5Q6 135 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 CASKO14936 926 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 ADAM12O43184 909 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 SOCS5O75159 536 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 C6orf47O95873 294 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TAS2R50P59544 299 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TGM3Q08188 693 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TARDBPQ13148 414 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBM47-201ENST00000295971 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 KREMEN2Q8NCW0 462 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 SLC22A17Q8WUG5 538 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 GTF2H4Q92759 462 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 COL21A1Q96P44 957 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 SPATA5L1Q9BVQ7 753 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 TRIM39Q9HCM9 518 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 HEBP1Q9NRV9 189 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 PAK1IP1Q9NWT1 392 aaPredicted RBP13.04□□□□□ -0.32
RBM47-201ENST00000295971 STMN3Q9NZ72 180 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 PTGFRNQ9P2B2 879 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
RBM47-201ENST00000295971 PRR23D1E9PI22 279 aaPredicted RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 SCAMP1O15126 338 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 MMP2P08253 660 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 PRR23D2P0DMB1 279 aaPredicted RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 PCSK2P16519 638 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 SF1Q15637 639 aaKnown RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 DCP2Q8IU60 420 aaKnown RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 CDK20Q8IZL9 346 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 SLC43A3Q8NBI5 491 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 USP7Q93009 1102 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 ADAM30Q9UKF2 790 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 CFAP20Q9Y6A4 193 aaKnown RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 A0A1B0GTL3 188 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 COL11A2P13942 1736 aaPredicted RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 TNFRSF1BP20333 461 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 MATN1P21941 496 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 CTNNB1P35222 781 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 WASP42768 502 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 ALDH3B2P48448 385 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 TAS2R41P59536 307 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 NPRL3Q12980 569 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 CLCA4Q14CN2 919 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 TAS1R1Q7RTX1 841 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
RBM47-201ENST00000295971 TICAM1Q8IUC6 712 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 OR8D1Q8WZ84 308 aa13.03□□□□□ -0.32
RBM47-201ENST00000295971 RAD51AP1Q96B01 352 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms