RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DOK6Q6PKX4 331 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CRTC3Q6UUV7 619 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 MILR1Q7Z6M3 343 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 FAM124AQ86V42 546 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 NSMCE2Q96MF7 247 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CGREF1Q99674 301 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 APOOQ9BUR5 198 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 BDH2Q9BUT1 245 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 SLC29A3Q9BZD2 475 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CAAP1Q9H8G2 361 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 FAM8A1Q9UBU6 413 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 RSL24D1Q9UHA3 163 aaKnown RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 OAZ3Q9UMX2 235 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 EIF3LQ9Y262 564 aaKnown RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CCDC160A6NGH7 325 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 H0YAE9 185 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 ZNF217O75362 1048 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 HNRNPA2B1P22626 353 aaKnown RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CAPGP40121 348 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 PREPP48147 710 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 NUBP1P53384 320 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 KIAA1024LP59773 190 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 DMPKQ09013 629 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 MTAPQ13126 283 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 ANGPT1Q15389 498 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 AP5B1Q2VPB7 878 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 SCIMPQ6UWF3 145 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 TRIM46Q7Z4K8 759 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 C11orf96Q7Z7L8 435 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 C1orf210Q8IVY1 113 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 OR52E4Q8NGH9 312 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 KLK6Q92876 244 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 PRRX2Q99811 253 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 TIMM29Q9BSF4 260 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 LGR4Q9BXB1 951 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CHRDQ9H2X0 955 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 ACTL8Q9H568 366 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 INTS7Q9NVH2 962 aaKnown RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 SMPD3Q9NY59 655 aaPredicted RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 ZNHIT2Q9UHR6 403 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 SLC17A4Q9Y2C5 497 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CCL27Q9Y4X3 112 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 MYOCOSA0A1B0GUC4 107 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 SLC31A1O15431 190 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 PRSS23O95084 383 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 SEMA4FO95754 770 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 G6PDP11413 515 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 MTHFD1P11586 935 aaKnown RBP16.23■□□□□ 0.19
CPSF4-201ENST00000292476 HRH2P25021 359 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 HTR1BP28222 390 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 MAT2AP31153 395 aaKnown RBP16.23■□□□□ 0.19
CPSF4-201ENST00000292476 AKT2P31751 481 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 TTKP33981 857 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 IGFALSP35858 605 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 SLC6A12P48065 614 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 HTR6P50406 440 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 GAS6Q14393 721 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 METRNLQ641Q3 311 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 TTC33Q6PID6 262 aaPredicted RBP16.23■□□□□ 0.19
CPSF4-201ENST00000292476 RIMKLAQ8IXN7 391 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 TSTD1Q8NFU3 115 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 FAM110BQ8TC76 370 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 ESAMQ96AP7 390 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 BIRC7Q96CA5 298 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 KCNH6Q9H252 994 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 RPF2Q9H7B2 306 aaKnown RBP16.23■□□□□ 0.19
CPSF4-201ENST00000292476 DNAJC11Q9NVH1 559 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 GULP1Q9UBP9 304 aa16.23■□□□□ 0.19
CPSF4-201ENST00000292476 ARHGEF33A8MVX0 844 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 KCNH1O95259 989 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 C1orf105O95561 183 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 PDHA2P29803 388 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 ACSL1P33121 698 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 CCR5P51681 352 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 ESRRGP62508 458 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 YPEL5P62699 121 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 YBX1P67809 324 aaKnown RBP16.22■□□□□ 0.19
CPSF4-201ENST00000292476 KIAA0040Q15053 153 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 SLC2A7Q6PXP3 512 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 ABRAXAS1Q6UWZ7 409 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 PATL1Q86TB9 770 aaKnown RBP16.22■□□□□ 0.19
CPSF4-201ENST00000292476 PDZD3Q86UT5 571 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 IFNEQ86WN2 208 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 ERI1Q8IV48 349 aaKnown RBP16.22■□□□□ 0.19
CPSF4-201ENST00000292476 KLHDC8AQ8IYD2 350 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 FAM9CQ8IZT9 166 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 DHRSXQ8N5I4 330 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 CDK15Q96Q40 435 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 SH3GL1Q99961 368 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 GORASP2Q9H8Y8 452 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 HS3ST3A1Q9Y663 406 aa16.22■□□□□ 0.19
CPSF4-201ENST00000292476 PLOD2O00469 737 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 LAMTOR5O43504 91 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 LATO43561 262 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 UGDHO60701 494 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 DEAF1O75398 565 aaPredicted RBP16.21■□□□□ 0.19
CPSF4-201ENST00000292476 GMNNO75496 209 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 CLDN9O95484 217 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 APBB3O95704 486 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms