RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 FGF19O95750 216 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 HTR1AP08908 422 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 CISD3P0C7P0 127 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 AQP1P29972 269 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 HNF4AP41235 474 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 VIPR2P41587 438 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 VLDLRP98155 873 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 MEF2AQ02078 507 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 SIM2Q14190 667 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 STARD3Q14849 445 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 DPY19L1Q2PZI1 675 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 FKBP9P1Q75LS8 142 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 CYP4Z1Q86W10 505 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 OR8J2Q8NGG1 315 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 CNIH3Q8TBE1 160 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 SPPL3Q8TCT6 385 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 DTNBP1Q96EV8 351 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 C11orf24Q96F05 449 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 FOPNLQ96NB1 174 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 VPS35Q96QK1 796 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 LHPPQ9H008 270 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 TPT1P8Q9HAU6 139 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 SH3BP4Q9P0V3 963 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 SCAMP2O15127 329 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 CPNE6O95741 557 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 ACPPP15309 386 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 GPX2P18283 190 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 KDELR2P33947 212 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 BMPR1AP36894 532 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 NUP107P57740 925 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 DCTN2Q13561 401 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 RBM48Q5RL73 367 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 CPTPQ5TA50 214 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 HIPK1Q86Z02 1210 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 SFTPA1Q8IWL2 248 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 OR13F1Q8NGS4 319 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 OR56A3Q8NH54 315 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 ZNF480Q8WV37 535 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 HDAC2Q92769 488 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 TPD52L3Q96J77 140 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 MAGEB10Q96LZ2 347 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 ZDHHC4Q9NPG8 344 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 IL1RAPQ9NPH3 570 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 MARK1Q9P0L2 795 aa17.71■□□□□ 0.43
SHKBP1-201ENST00000291842 PRRT4C9JH25 899 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ZNF701M0R085 212 aaPredicted RBP17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 QSOX1O00391 747 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 SPINT1O43278 529 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ABCB7O75027 752 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 SOD1P00441 154 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 FGBP02675 491 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ADH5P11766 374 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 IGFBP5P24593 272 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 MAGEA2P43356 314 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 SLC6A11P48066 632 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ENTPD1P49961 510 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 EMP3P54852 163 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ISL1P61371 349 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ST8SIA6P61647 398 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 EPS8Q12929 822 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 OR2T5Q6IEZ7 315 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 PDE12Q6L8Q7 609 aaKnown RBP17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 MSANTD1Q6ZTZ1 278 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 SPARTQ8N0X7 666 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 OR2T29Q8NH02 315 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 SNX19Q92543 992 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 RSPRY1Q96DX4 576 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 HSH2DQ96JZ2 352 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 RIBC2Q9H4K1 309 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 RAD18Q9NS91 495 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 FAM120CQ9NX05 1096 aaKnown RBP17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 DKK3Q9UBP4 350 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 ORC6Q9Y5N6 252 aa17.71■□□□□ 0.42
SHKBP1-201ENST00000291842 C1orf105O95561 183 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 IL1RNP18510 177 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 TTKP33981 857 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 GALK1P51570 392 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 TBPL1P62380 186 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 RAPSNQ13702 412 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 IER5LQ5T953 404 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 SHQ1Q6PI26 577 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 ZNF420Q8TAQ5 688 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 FZD4Q9ULV1 537 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 MRPS23Q9Y3D9 190 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 KCNE2Q9Y6J6 123 aa17.7■□□□□ 0.42
SHKBP1-201ENST00000291842 ANTXRLA6NF34 631 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 MGAT4DA6NG13 374 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 BCKDKO14874 412 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 XPNPEP2O43895 674 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 TLL1O43897 1013 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 PRMT3O60678 531 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 DAPP51397 102 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 IL5RAQ01344 420 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 GAB1Q13480 694 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 SKIV2LQ15477 1246 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 ZNF691Q5VV52 312 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 RAET1GQ6H3X3 334 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 ANGPTL8Q6UXH0 198 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 SLCO4C1Q6ZQN7 724 aa17.69■□□□□ 0.42
SHKBP1-201ENST00000291842 C2orf73Q8N5S3 287 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms