RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 BTN3A2P78410 334 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 NPTX1Q15818 432 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 COLEC12Q5KU26 742 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CATSPEREQ5SY80 951 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 KIAA1161Q6NSJ0 714 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 KDELC1Q6UW63 502 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 KRT74Q7RTS7 529 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 TICAM1Q8IUC6 712 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CYP4Z2PQ8N1L4 340 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ZNF671Q8TAW3 534 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 TEX47Q8TBZ9 253 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 IRF7Q92985 503 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ACDQ96AP0 544 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 COQ7Q99807 217 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 TRIT1Q9H3H1 467 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 KCNK12Q9HB15 430 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 IL26Q9NPH9 171 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 PRDM8Q9NQV8 689 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 RIMKLBQ9ULI2 386 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 DHRS7Q9Y394 339 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 A8MV72 311 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 LOC110117498-PIK3R3F6TDL0 507 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 B4GALT3O60512 393 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 NFATC1O95644 943 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 KRT20P35900 424 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 OLR1P78380 273 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FPGSQ05932 587 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 RFTN1Q14699 578 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 RPS26P11Q5JNZ5 115 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 TPGS2Q68CL5 300 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CCDC80Q76M96 950 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ADAMTS15Q8TE58 950 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 HERVK_113Q902F9 699 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FAIM2Q9BWQ8 316 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 C1QTNF7Q9BXJ2 289 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 MRPS30Q9NP92 439 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 DNAAF2Q9NVR5 837 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 DNAJC27Q9NZQ0 273 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CEP350Q5VT06 3117 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 AP3D1O14617 1153 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ZNF623O75123 536 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 NME6O75414 186 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 CKMT1AP12532 417 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FDXRP22570 491 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 HTR1BP28222 390 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ACTR1BP42025 376 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ACTR1AP61163 376 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ARF5P84085 180 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 MC1RQ01726 317 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 RGS1Q08116 209 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 DAG1Q14118 895 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 SELPLGQ14242 412 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 PRAMEF14Q5SWL7 426 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 PRAMEF13Q5VWM6 474 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FAM46CQ5VWP2 391 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CES4AQ5XG92 561 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FAAH2Q6GMR7 532 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 SNX29P2Q8IUI4 249 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 OR4N5Q8IXE1 308 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FAM98AQ8NCA5 519 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 GPR26Q8NDV2 337 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ENKURQ8TC29 256 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 STON2Q8WXE9 905 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 PIGKQ92643 395 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 EGLN2Q96KS0 407 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 GAL3ST4Q96RP7 486 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ZNF607Q96SK3 696 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 SERHL2Q9H4I8 314 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 SERHLQ9NQF3 203 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.64□□□□□ -1.67
UBR1-201ENST00000290650 SNTG1Q9NSN8 517 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 ACTR3BQ9P1U1 418 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 DLGAP4Q9Y2H0 992 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 RBM47A0AV96 593 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 KRBA1A5PL33 1030 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 HHLA1C9JL84 531 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 OAZ2O95190 189 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 BCKDHAP12694 445 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CD72P21854 359 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 FSHRP23945 695 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 VIPR1P32241 457 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 DNAJB13P59910 316 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 DSC3Q14574 896 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 LASP1Q14847 261 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 TCEAL5Q5H9L2 206 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 DCST1Q5T197 706 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 LUZP2Q86TE4 346 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 CCDC116Q8IYX3 515 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 LKAAEAR1Q8TD35 194 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 MZB1Q8WU39 189 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 TFGQ92734 400 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 C12orf43Q96C57 262 aaKnown RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 TEX37Q96LM6 180 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 UHRF1Q96T88 793 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 CCM2Q9BSQ5 444 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 TNFRSF12AQ9NP84 129 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 PHPT1Q9NRX4 125 aaPredicted RBP4.64□□□□□ -1.67
UBR1-201ENST00000290650 SPATA2Q9UM82 520 aa4.64□□□□□ -1.67
UBR1-201ENST00000290650 SEC16AO15027 2179 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms