RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 TIPRLO75663 272 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 GABRG2P18507 467 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 HPCAL1P37235 193 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ALG1LQ6GMV1 187 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 DGLUCYQ7Z3D6 616 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 CPSF7Q8N684 471 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ATOH1Q92858 354 aaPredicted RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ECHDC3Q96DC8 303 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OR2M4Q96R27 311 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 C17orf62Q9BQA9 187 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 S1PR5Q9H228 398 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 CUEDC1Q9NWM3 386 aaPredicted RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ADPRHL2Q9NX46 363 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 TMCO1Q9UM00 188 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SIT1Q9Y3P8 196 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ALPK2Q86TB3 2170 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SLC28A1O00337 649 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 KIF1CO43896 1103 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 NME6O75414 186 aaPredicted RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 HNRNPA2B1P22626 353 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SLC18A1P54219 525 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OLR1P78380 273 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 FGD3Q5JSP0 725 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 FRG2Q64ET8 278 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ZCCHC8Q6NZY4 707 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 PQLC1Q8N2U9 271 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OR9A1PQ8NGU1 263 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ZNF480Q8WV37 535 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 FRG2BQ96QU4 278 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 YIPF4Q9BSR8 244 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 CCDC28BQ9BUN5 200 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 FAM149AA5PLN7 773 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OR6C74A6NCV1 312 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 NDUFS4O43181 175 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 PRAMEF10O60809 474 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ATP6V1C1P21283 382 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 CSNK1DP48730 415 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 TGM3Q08188 693 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 HSPB3Q12988 150 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 PDK3Q15120 406 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ADRM1Q16186 407 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SPANXN4Q5MJ08 99 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 MACC1Q6ZN28 852 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 LPCAT2Q7L5N7 544 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SPPL2CQ8IUH8 684 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OR2I1PQ8NGU4 316 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 HM13Q8TCT9 377 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 WDR60Q8WVS4 1066 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 RAB7BQ96AH8 199 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 WDR92Q96MX6 357 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SMAD5Q99717 465 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SMOC1Q9H4F8 434 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 PAPOLBQ9NRJ5 636 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 C6orf203Q9P0P8 240 aaPredicted RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ZFR2Q9UPR6 939 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 WDR37Q9Y2I8 494 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 U3KQV3 271 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 AREL1O15033 823 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SGTAO43765 313 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 GMFGO60234 142 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 S100A5P33763 92 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 NUP107P57740 925 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 NAA20P61599 178 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OR4F3Q6IEY1 312 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 NEK5Q6P3R8 708 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 ZC3H7AQ8IWR0 971 aaKnown RBP8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 OR1E3Q8WZA6 343 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SHDQ96IW2 340 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 SPACA7Q96KW9 195 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 F2RL3Q96RI0 385 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 CIB1Q99828 191 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 HRASLS2Q9NWW9 162 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 RAPGEFL1Q9UHV5 662 aa8.73□□□□□ -1.01
CCDC144B-201ENST00000285176 FRMPD3Q5JV73 1810 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 SDK2Q58EX2 2172 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 H3BN98 237 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 BTN3A3O00478 584 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 MGRN1O60291 552 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 HNRNPCP07910 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 MTHFD1P11586 935 aaKnown RBP8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 PSMB9P28065 219 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 CXCL12P48061 93 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 TAS2R38P59533 333 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 RUNX1T1Q06455 604 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 C2orf80Q0P641 193 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 MTX3Q5HYI7 312 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 C6orf136Q5SQH8 315 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 MED27Q6P2C8 311 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 AAGABQ6PD74 315 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 CYP20A1Q6UW02 462 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 CLVS1Q8IUQ0 354 aaPredicted RBP8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 CBARPQ8N350 705 aaPredicted RBP8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 MCMBPQ9BTE3 642 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 DPH7Q9BTV6 452 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 P2RY12Q9H244 342 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 S100A14Q9HCY8 104 aa8.72□□□□□ -1.01
CCDC144B-201ENST00000285176 MRPS30Q9NP92 439 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms