RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 GPR151Q8TDV0 419 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 MTERF1Q99551 399 aaKnown RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 RANGRFQ9HD47 186 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 NUFIP1Q9UHK0 495 aaKnown RBP12.51□□□□□ -0.41
COL8A1-202ENST00000273342 TBC1D24Q9ULP9 559 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 DUSP12Q9UNI6 340 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
COL8A1-202ENST00000273342 CLCA1A8K7I4 914 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 J3KTA2 159 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 YY2O15391 372 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 CLDN9O95484 217 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 SOX3P41225 446 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 RGS4P49798 205 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 GANABQ14697 944 aaKnown RBP12.5□□□□□ -0.41
COL8A1-202ENST00000273342 BAK1Q16611 211 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 NEK5Q6P3R8 708 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF517Q6ZMY9 492 aaPredicted RBP12.5□□□□□ -0.41
COL8A1-202ENST00000273342 ARMCX6Q7L4S7 300 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 SYT12Q8IV01 421 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 ZZZ3Q8IYH5 903 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 MYDGFQ969H8 173 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 SH3KBP1Q96B97 665 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 IL4I1Q96RQ9 567 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 COPS8Q99627 209 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 CRISPLD1Q9H336 500 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 GIMAP4Q9NUV9 329 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 GOLGA4Q13439 2230 aaKnown RBP12.5□□□□□ -0.41
COL8A1-202ENST00000273342 DRGXA6NNA5 263 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 M0QZQ0 153 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 EPN2O95208 641 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 KRT6AP02538 564 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 KRT6BP04259 564 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 CDK1P06493 297 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 CHRNB1P11230 501 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 COX7A2P14406 83 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 SSTR4P31391 388 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 KRT6CP48668 564 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 CLDN8P56748 225 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 HSPA14Q0VDF9 509 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 PTCHD3Q3KNS1 767 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 FAM209AQ5JX71 171 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF544Q6NX49 715 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 PTOV1Q86YD1 416 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 PHOX2BQ99453 314 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 SLC30A2Q9BRI3 323 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 CCM2Q9BSQ5 444 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 TRPV5Q9NQA5 729 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 PCDH10Q9P2E7 1040 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 TRPV2Q9Y5S1 764 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 PEX16Q9Y5Y5 336 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
COL8A1-202ENST00000273342 DOCK4Q8N1I0 1966 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 MAGEB17A8MXT2 336 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 K7ERQ8 282 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 SEMA3DO95025 777 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 C9P02748 559 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 RHOCP08134 193 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 PRKCAP17252 672 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 SOX6P35712 828 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 FEN1P39748 380 aaKnown RBP12.49□□□□□ -0.41
COL8A1-202ENST00000273342 Q5BKY6 102 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 RNF219Q5W0B1 726 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-202ENST00000273342 KLHL17Q6TDP4 642 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-202ENST00000273342 B3GNT7Q8NFL0 401 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 ADGRE3Q9BY15 652 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 OR2B2Q9GZK3 357 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 P2RY12Q9H244 342 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 UNC80Q8N2C7 3258 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 FAM227AF5H4B4 570 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 SPIBQ01892 262 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 PRKCDQ05655 676 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 GRB14Q14449 540 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 LRIF1Q5T3J3 769 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 C10orf62Q5T681 223 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-202ENST00000273342 LAX1Q8IWV1 398 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 PLPP6Q8IY26 295 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 UBQLNLQ8IYU4 475 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 WDR36Q8NI36 951 aaKnown RBP12.49□□□□□ -0.41
COL8A1-202ENST00000273342 ST6GAL2Q96JF0 529 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 HRASLS5Q96KN8 279 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 SUSD3Q96L08 255 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 MGLLQ99685 303 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 IRF2BPLQ9H1B7 796 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 FNIP2Q9P278 1114 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
COL8A1-202ENST00000273342 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 EFCAB10A6NFE3 127 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 CPNE3O75131 537 aaKnown RBP12.48□□□□□ -0.41
COL8A1-202ENST00000273342 WDR47O94967 919 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 LAMP1P11279 417 aa12.48□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF7P17097 686 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms