RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 CAP1Q01518 475 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 TTLL9Q3SXZ7 439 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 INO80DQ53TQ3 878 aaPredicted RBP16.35■□□□□ 0.21
RTN1-201ENST00000267484 ATAD3BQ5T9A4 648 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 FRG2Q64ET8 278 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 EIF3MQ7L2H7 374 aaKnown RBP16.35■□□□□ 0.21
RTN1-201ENST00000267484 SPPL2AQ8TCT8 520 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 FRG2BQ96QU4 278 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 BCL7BQ9BQE9 202 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 TPT1P8Q9HAU6 139 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 RDH14Q9HBH5 336 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 RPS6KA6Q9UK32 745 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
RTN1-201ENST00000267484 CASP8AP2Q9UKL3 1982 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 PSMD11O00231 422 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 DSCR3O14972 297 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 SSX4O60224 188 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 ALOX12P18054 663 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 CD22P20273 847 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 PRKCZQ05513 592 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 IQCCQ4KMZ1 466 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
RTN1-201ENST00000267484 FAM124AQ86V42 546 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 HEATR4Q86WZ0 1026 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 GALNT13Q8IUC8 556 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 MINDY2Q8NBR6 621 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 SIGLEC11Q96RL6 698 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 CHCHD6Q9BRQ6 235 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 KCTD5Q9NXV2 234 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 FZD4Q9ULV1 537 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 HSPE1-MOB4S4R3N1 261 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 MICAL3Q7RTP6 2002 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 TLL1O43897 1013 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 C1QTNF12Q5T7M4 302 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 LRRC66Q68CR7 880 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 TPGS1Q6ZTW0 290 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 UTP15Q8TED0 518 aaKnown RBP16.34■□□□□ 0.21
RTN1-201ENST00000267484 STARD8Q92502 1023 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 ALG14Q96F25 216 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 C7orf34Q96L11 122 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 CENPOQ9BU64 300 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 KLF16Q9BXK1 252 aaPredicted RBP16.34■□□□□ 0.21
RTN1-201ENST00000267484 MARCH7Q9H992 704 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 CCNB1IP1Q9NPC3 277 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 ERVW-1Q9UQF0 538 aa16.34■□□□□ 0.21
RTN1-201ENST00000267484 METTL15A6NJ78 407 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 AGRPO00253 132 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 C9P02748 559 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 PRKAR2AP13861 404 aaKnown RBP16.33■□□□□ 0.21
RTN1-201ENST00000267484 GPX2P18283 190 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 STK19P49842 368 aaPredicted RBP16.33■□□□□ 0.21
RTN1-201ENST00000267484 ITGA1P56199 1179 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 KCNJ10P78508 379 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 FAHD1Q6P587 224 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 TSEN54Q7Z6J9 526 aaKnown RBP16.33■□□□□ 0.21
RTN1-201ENST00000267484 SCAIQ8N9R8 606 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 ASIC4Q96FT7 647 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 PCDHB7Q9Y5E2 793 aa16.33■□□□□ 0.21
RTN1-201ENST00000267484 PABPN1LA6NDY0 278 aaKnown RBP16.33■□□□□ 0.2
RTN1-201ENST00000267484 GFRA2O00451 464 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 GALTP07902 379 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 ZNF648Q5T619 568 aaPredicted RBP16.33■□□□□ 0.2
RTN1-201ENST00000267484 DESI1Q6ICB0 168 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 CRTC1Q6UUV9 634 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 NLGN4XQ8N0W4 816 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 SLC5A8Q8N695 610 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 GPR156Q8NFN8 814 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 GGHQ92820 318 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 CDK5RAP1Q96SZ6 601 aaKnown RBP16.33■□□□□ 0.2
RTN1-201ENST00000267484 TMEM161AQ9NX61 479 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 AGAP5A6NIR3 686 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 A6NL46 340 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 CLDN24A6NM45 220 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 SNPHO15079 494 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 PTHP01270 115 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 HIST1H2AGP0C0S8 130 aaPredicted RBP16.33■□□□□ 0.2
RTN1-201ENST00000267484 HIST1H2ADP20671 130 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 CTSKP43235 329 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 GAB1Q13480 694 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 DGKKQ5KSL6 1271 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 TPRG1LQ5T0D9 272 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 UBE2UQ5VVX9 321 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 NAGSQ8N159 534 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 DNAJB8Q8NHS0 232 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
RTN1-201ENST00000267484 HIST1H2AHQ96KK5 128 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 COPS8Q99627 209 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 HIST1H2AJQ99878 128 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 H2AFJQ9BTM1 129 aa16.33■□□□□ 0.2
RTN1-201ENST00000267484 PCDH7O60245 1069 aa16.32■□□□□ 0.2
RTN1-201ENST00000267484 RFPL2O75678 378 aa16.32■□□□□ 0.2
RTN1-201ENST00000267484 ETHE1O95571 254 aa16.32■□□□□ 0.2
RTN1-201ENST00000267484 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
RTN1-201ENST00000267484 NSG1P42857 185 aa16.32■□□□□ 0.2
RTN1-201ENST00000267484 AP1S1P61966 158 aa16.32■□□□□ 0.2
RTN1-201ENST00000267484 HKDC1Q2TB90 917 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms