RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 GALNT5Q7Z7M9 940 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 RBM23Q86U06 439 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 GPR156Q8NFN8 814 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF420Q8TAQ5 688 aaPredicted RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 ATL1Q8WXF7 558 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 HDAC2Q92769 488 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 SH3KBP1Q96B97 665 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 AP2M1Q96CW1 435 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 BARD1Q99728 777 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 CCM2Q9BSQ5 444 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 UBE2ZQ9H832 354 aaPredicted RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 RAD18Q9NS91 495 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 SPATA6Q9NWH7 488 aaPredicted RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 TBC1D14Q9P2M4 693 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 RUVBL1Q9Y265 456 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 COQ6Q9Y2Z9 468 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 A0A1W2PPW3 197 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 MAGEB17A8MXT2 336 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 hCG_2039718K7EN88 272 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 YY2O15391 372 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 ABCB7O75027 752 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 MITFO75030 526 aaPredicted RBP12.46□□□□□ -0.42
CPSF6-201ENST00000266679 MYO1DO94832 1006 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 DIRAS1O95057 198 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 CCNDBP1O95273 360 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 LAMP1P11279 417 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 IL1RNP18510 177 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 AGXTP21549 392 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 IMPA1P29218 277 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 PDHA2P29803 388 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 PRLHRP49683 370 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 PIGFQ07326 219 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 CD47Q08722 323 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.42
CPSF6-201ENST00000266679 DPY19L1Q2PZI1 675 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 HKDC1Q2TB90 917 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 TCEAL5Q5H9L2 206 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 KIAA0907Q7Z7F0 614 aaPredicted RBP12.46□□□□□ -0.42
CPSF6-201ENST00000266679 SERPINA11Q86U17 422 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 TRIM74Q86UV6 250 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 HIPK1Q86Z02 1210 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 CHPFQ8IZ52 775 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 C1orf52Q8N6N3 182 aaKnown RBP12.46□□□□□ -0.42
CPSF6-201ENST00000266679 ARL10Q8N8L6 244 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 CCDC138Q96M89 665 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 AASDHPPTQ9NRN7 309 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 NFKBIL1Q9UBC1 381 aaPredicted RBP12.46□□□□□ -0.42
CPSF6-201ENST00000266679 TMEFF2Q9UIK5 374 aaPredicted RBP12.46□□□□□ -0.42
CPSF6-201ENST00000266679 ORC6Q9Y5N6 252 aa12.46□□□□□ -0.42
CPSF6-201ENST00000266679 hCG_2014768A0A024R1R8 64 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 LOC100130705A0A1B0GUX0 176 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 MYO1GB0I1T2 1018 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 QSOX1O00391 747 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 KPNA3O00505 521 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 PRMT3O60678 531 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SLC16A8O95907 504 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 EPCAMP16422 314 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 CEBPBP17676 345 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 MATN1P21941 496 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 METAP1P53582 386 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 RAE1P78406 368 aaKnown RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 TMEM115Q12893 351 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 CBX2Q14781 532 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 VMACQ2NL98 169 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 C6orf141Q5SZD1 244 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 ERAP2Q6P179 960 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 LIPIQ6XZB0 460 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 PTOV1Q86YD1 416 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 DCP2Q8IU60 420 aaKnown RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 LMNTD1Q8N9Z9 388 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 TERB1Q8NA31 727 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 OR13F1Q8NGS4 319 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 VPS35Q96QK1 796 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 DOK1Q99704 481 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 FAM120CQ9NX05 1096 aaKnown RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 LMCD1Q9NZU5 365 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 C3orf18Q9UK00 162 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 BTBD3Q9Y2F9 522 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 BCKDKO14874 412 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SCAMP2O15127 329 aaKnown RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SCN2BO60939 215 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 KCNK5O95279 499 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 CYP4B1P13584 511 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 IGFBP5P24593 272 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 BMPR1AP36894 532 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 HNF4AP41235 474 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 MAGEA2P43356 314 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 RPS6KA3P51812 740 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 HNRNPFP52597 415 aaKnown RBP12.45□□□□□ -0.42
CPSF6-201ENST00000266679 C16orf72Q14CZ0 275 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 ZNF691Q5VV52 312 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 XAF1Q6GPH4 301 aa12.45□□□□□ -0.42
CPSF6-201ENST00000266679 SHQ1Q6PI26 577 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms