RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 USP3Q9Y6I4 520 aa14.96□□□□□ -0.01
TIMP3-201ENST00000266085 H7BY64 318 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 M0QX08 132 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 H6PDO95479 791 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 OPN1SWP03999 348 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 JUNP05412 331 aaKnown RBP14.96□□□□□ -0.02
TIMP3-201ENST00000266085 BTN3A2P78410 334 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 MEF2AQ02078 507 aaPredicted RBP14.96□□□□□ -0.02
TIMP3-201ENST00000266085 PTGES3Q15185 160 aaKnown RBP14.96□□□□□ -0.02
TIMP3-201ENST00000266085 ALKAL1Q6UXT8 129 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 RPTNQ6XPR3 784 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 PRAP1Q96NZ9 151 aa14.96□□□□□ -0.02
TIMP3-201ENST00000266085 SCN9AQ15858 1988 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 DDX60Q8IY21 1712 aaKnown RBP14.95□□□□□ -0.02
TIMP3-201ENST00000266085 IL12BP29460 328 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 CDK6Q00534 326 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 ZNF846Q147U1 533 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 PNPLA1Q8N8W4 532 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 ATP6V1C2Q8NEY4 427 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 OR4C6Q8NH72 309 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 LMX1AQ8TE12 382 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 SCRN2Q96FV2 425 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 TMEM74Q96NL1 305 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 XKR8Q9H6D3 395 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 UTS2RQ9UKP6 389 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 ANKRD36CQ5JPF3 1778 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 ANKRD12Q6UB98 2062 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 DPPA5A6NC42 116 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 IGLON5A6NGN9 336 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 RHAGQ02094 409 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 C10orf62Q5T681 223 aaPredicted RBP14.95□□□□□ -0.02
TIMP3-201ENST00000266085 NPAS3Q8IXF0 933 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 MRPL43Q8N983 215 aaKnown RBP14.95□□□□□ -0.02
TIMP3-201ENST00000266085 OR10G2Q8NGC3 310 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 TSPEARQ8WU66 669 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 CDADC1Q9BWV3 514 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 RPRD1BQ9NQG5 326 aaKnown RBP14.95□□□□□ -0.02
TIMP3-201ENST00000266085 ZDHHC7Q9NXF8 308 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 CYP8B1Q9UNU6 501 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 CLCA3PQ9Y6N3 262 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 NHSQ6T4R5 1651 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 TJP1Q07157 1748 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 AGR2O95994 175 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 ACADVLP49748 655 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 CDKN2DP55273 166 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 P2RY8Q86VZ1 359 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 SNX33Q8WV41 574 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 CLEC4MQ9H2X3 399 aaPredicted RBP14.95□□□□□ -0.02
TIMP3-201ENST00000266085 C11orf16Q9NQ32 467 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 MTMR10Q9NXD2 777 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 DLGAP4Q9Y2H0 992 aa14.95□□□□□ -0.02
TIMP3-201ENST00000266085 SDHDO14521 159 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 ALOX5P09917 674 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 BPIP17213 487 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 IL12RB1P42701 662 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 GRK6P43250 576 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 SPINT3P49223 89 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 GANABQ14697 944 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PDCD4Q53EL6 469 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 NECTIN4Q96NY8 510 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 COPS4Q9BT78 406 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 WDR12Q9GZL7 423 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 TVP23BQ9NYZ1 205 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 ZCWPW2A0A1B0GU75 182 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PDLIM1O00151 329 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 SLC30A4O14863 429 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 SMAD6O43541 496 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 NPPAP01160 153 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 OR2T5Q6IEZ7 315 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 LAPTM4BQ86VI4 370 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PACRGLQ8N7B6 248 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 OR2T29Q8NH02 315 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 OR2M4Q96R27 311 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 GTPBP2Q9BX10 602 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 TAPBPLQ9BX59 468 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 SLC46A2Q9BY10 475 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PRSS56P0CW18 603 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 NTSR1P30989 418 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 ZNF763Q0D2J5 394 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 CRB2Q5IJ48 1285 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 CEACAM20Q6UY09 585 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 GEMIN6Q8WXD5 167 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 MGME1Q9BQP7 344 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PRRG4Q9BZD6 226 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PHF11Q9UIL8 331 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 SPO11Q9Y5K1 396 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 OAS3Q9Y6K5 1087 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PIAS3Q9Y6X2 628 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 TCRBV21S2A2A0A5A6 115 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PSMD11O00231 422 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 WWP2O00308 870 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 C6P13671 934 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 DNAJA1P31689 397 aaKnown RBP14.94□□□□□ -0.02
TIMP3-201ENST00000266085 MOGSQ13724 837 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 PKDCCQ504Y2 493 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 RAB41Q5JT25 222 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 SMARCD3Q6STE5 483 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 TREML1Q86YW5 311 aa14.94□□□□□ -0.02
TIMP3-201ENST00000266085 LGI4Q8N135 537 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms