RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CCDC157Q569K6 752 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 TMTC4Q5T4D3 741 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 PHF19Q5T6S3 580 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 CYB5D1Q6P9G0 228 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 RAB11FIP2Q7L804 512 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 LSMEM2Q8N112 164 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 ARHGEF39Q8N4T4 335 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 RCBTB1Q8NDN9 531 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 ZBTB9Q96C00 473 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 NSUN5Q96P11 429 aaKnown RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 ZFYVE21Q9BQ24 234 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 AIF1LQ9BQI0 150 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 DRC3Q9H069 523 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 NOL11Q9H8H0 719 aaKnown RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 SYNPO2LQ9H987 977 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 HAO1Q9UJM8 370 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 ZNF490Q9ULM2 529 aaPredicted RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 PLCL2Q9UPR0 1127 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 KLHL20Q9Y2M5 609 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 AP1M2Q9Y6Q5 423 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 TPRP12270 2363 aaKnown RBP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SERTM1A2A2V5 107 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 A8MU76 341 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 PPP6CO00743 305 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 UBFD1O14562 309 aaKnown RBP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 KLF11O14901 512 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 PLD2O14939 933 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 MAP3K7O43318 606 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 LCMT2O60294 686 aaKnown RBP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SUPT7LO94864 414 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 CLDN9O95484 217 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 ESRRBO95718 433 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 OTCP00480 354 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 CDH13P55290 713 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 CLDN6P56747 220 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SHC2P98077 582 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 IRF8Q02556 426 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 ZNF33BQ06732 778 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 CHIT1Q13231 466 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 TSTA3Q13630 321 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 PRTGQ2VWP7 1150 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SNAP47Q5SQN1 464 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 CES4AQ5XG92 561 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 GRHL2Q6ISB3 625 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 RNF165Q6ZSG1 346 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 VN1R4Q7Z5H5 301 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 MCATQ8IVS2 390 aaKnown RBP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SNX31Q8N9S9 440 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 MFSD9Q8NBP5 474 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 OR52B6Q8NGF0 335 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 UBE2E3Q969T4 207 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 ZPBPQ9BS86 351 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 MECRQ9BV79 373 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 DDA1Q9BW61 102 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 FGF21Q9NSA1 209 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 OCIAD1Q9NX40 245 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 FAM53CQ9NYF3 392 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 NKIRAS1Q9NYS0 192 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 AKAP7Q9P0M2 348 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-201ENST00000265304 KLHL3Q9UH77 587 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 SCN3AQ9NY46 2000 aa13.66□□□□□ -0.22
SSBP1-201ENST00000265304 A0A1B0GTL3 188 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 HAT1O14929 419 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 NRP2O60462 931 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 TBX6O95947 436 aaPredicted RBP13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ONECUT2O95948 504 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 SERPINE1P05121 402 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ADRB1P08588 477 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 CCL4P13236 92 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 VARSP26640 1264 aaKnown RBP13.65□□□□□ -0.22
SSBP1-201ENST00000265304 SERPINB1P30740 379 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ARRB2P32121 409 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 GRK3P35626 688 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 SEPHS1P49903 392 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 RAB15P59190 212 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ERVPABLB-1P60509 514 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 SH3BP2P78314 561 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 PWP1Q13610 501 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 HSP90B2PQ58FF3 399 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 PAGE2BQ5JRK9 111 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 TCTE1Q5JU00 501 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 TMIGD1Q6UXZ0 262 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ATG14Q6ZNE5 492 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 TMPRSS11BQ86T26 416 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ANKRD53Q8N9V6 530 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 TTLQ8NG68 377 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 CREB3L4Q8TEY5 395 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 AGAP11Q8TF27 550 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 SREK1Q8WXA9 508 aaKnown RBP13.65□□□□□ -0.22
SSBP1-201ENST00000265304 TEFMQ96QE5 360 aaKnown RBP13.65□□□□□ -0.22
SSBP1-201ENST00000265304 SYNDIG1Q9H7V2 258 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 POLR1BQ9H9Y6 1135 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms