RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RHDQ02161 417 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 TXNRD3NBQ6F5E7 133 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 TMEM17Q86X19 198 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 SLC15A3Q8IY34 581 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 PHTF2Q8N3S3 785 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 ZBTB8BQ8NAP8 495 aaPredicted RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 FCRL5Q96RD9 977 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 IL36AQ9UHA7 158 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 FAM170BA6NMN3 283 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 NOTOA8MTQ0 251 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 SLC15A1P46059 708 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 RPS24P62847 133 aaKnown RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 USF2Q15853 346 aaPredicted RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 RBM20Q5T481 1227 aaKnown RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 THEM6Q8WUY1 208 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 STOMP27105 288 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 CARD16Q5EG05 197 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 ANKRD26P1Q6NSI1 321 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 GOLGA7Q7Z5G4 137 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 SMG8Q8ND04 991 aaKnown RBP17.51■□□□□ 0.39
COL5A3-201ENST00000264828 FBXO22Q8NEZ5 403 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 OR9I1Q8NGQ6 314 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 C17orf50Q8WW18 174 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 TMEM168Q9H0V1 697 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 IGLV3-22A0A075B6J6 115 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 CDC7O00311 574 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 C8BP07358 591 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 SFT2D3Q587I9 215 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 TMEM236Q5W0B7 351 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 KCTD9Q7L273 389 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 PNLDC1Q8NA58 520 aaKnown RBP17.51■□□□□ 0.39
COL5A3-201ENST00000264828 ACOT12Q8WYK0 555 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 NCSTNQ92542 709 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 KCNA7Q96RP8 456 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 UCK2Q9BZX2 261 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 NUDT15Q9NV35 164 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF726A6NNF4 738 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 GBAP04062 536 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 NRG3P56975 720 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 ABHD13Q7L211 337 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 NPAS4Q8IUM7 802 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 RNF38Q9H0F5 515 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 GALPQ9UBC7 116 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 SMSP52788 366 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 ENPP2Q13822 863 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 CYP27C1Q4G0S4 372 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 PDSS2Q86YH6 399 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 THAP6Q8TBB0 222 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 PYURFQ96I23 114 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 HSH2DQ96JZ2 352 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 TBL1XR1Q9BZK7 514 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 MCCC2Q9HCC0 563 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 UTS2RQ9UKP6 389 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.51■□□□□ 0.39
COL5A3-201ENST00000264828 E7EQ34 232 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 DUSP11O75319 330 aaKnown RBP17.51■□□□□ 0.39
COL5A3-201ENST00000264828 HMGN1P05114 100 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 GSK3BP49841 420 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 EFR3AQ14156 821 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 FAM76BQ5HYJ3 339 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 CAMK1GQ96NX5 476 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 SEC61A2Q9H9S3 476 aa17.51■□□□□ 0.39
COL5A3-201ENST00000264828 NOP16Q9Y3C1 178 aaKnown RBP17.51■□□□□ 0.39
COL5A3-201ENST00000264828 GNAO1P09471 354 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PTPN2P17706 415 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 EIF5AP63241 154 aaKnown RBP17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ANO7Q6IWH7 933 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PAMR1Q6UXH9 720 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 RGMAQ96B86 450 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 POLE4Q9NR33 117 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ISPDA4D126 451 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ERI3O43414 337 aaKnown RBP17.5■□□□□ 0.39
COL5A3-201ENST00000264828 TLX2O43763 284 aaPredicted RBP17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CD47Q08722 323 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CHRNA6Q15825 494 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 GRK1Q15835 563 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PRAMEF14Q5SWL7 426 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PRAMEF13Q5VWM6 474 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 LYSMD3Q7Z3D4 306 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 OR4F6Q8NGB9 312 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CYB5D2Q8WUJ1 264 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 OVCA2Q8WZ82 227 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF516Q92618 1163 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 DGAT2Q96PD7 388 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 ST6GALNAC4Q9H4F1 302 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 SLC33A1O00400 549 aaPredicted RBP17.5■□□□□ 0.39
COL5A3-201ENST00000264828 DLX3O60479 287 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 GAD2Q05329 585 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 CMTR2Q8IYT2 770 aaKnown RBP17.5■□□□□ 0.39
COL5A3-201ENST00000264828 BCAS3Q9H6U6 928 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 PLAGL1Q9UM63 463 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 TLR6Q9Y2C9 796 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 J3KR12 359 aa17.5■□□□□ 0.39
COL5A3-201ENST00000264828 TUBA4AP68366 448 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms