RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 WDR34Q96EX3 536 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 TGM7Q96PF1 710 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 FCRL4Q96PJ5 515 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 MACROD1Q9BQ69 325 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 PLCD4Q9BRC7 762 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 PELI2Q9HAT8 420 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 PRM3Q9NNZ6 103 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 VTI1BQ9UEU0 232 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 STK38LQ9Y2H1 464 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 RIF1Q5UIP0 2472 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 FAM221BA6H8Z2 402 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 C4orf47A7E2U8 309 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 MAGEB17A8MXT2 336 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 E9PBE3 544 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SLCO1B7G3V0H7 640 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 AGRPO00253 132 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 OR1F1O43749 312 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SH3BP5O60239 455 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 KLHL41O60662 606 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 UGDHO60701 494 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 CHEK2O96017 543 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 CD59P13987 128 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 ST6GAL1P15907 406 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 TGM1P22735 817 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 CD1CP29017 333 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 HNF4AP41235 474 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 CCL7P80098 99 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 DAB2P98082 770 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 REEP5Q00765 189 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 CYP4F3Q08477 520 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 E2F2Q14209 437 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 LSM12Q3MHD2 195 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SNAP47Q5SQN1 464 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 FRG2Q64ET8 278 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 TMEM198Q66K66 360 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 MED27Q6P2C8 311 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 FIGLAQ6QHK4 219 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 DBX2Q6ZNG2 339 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 TMPRSS9Q7Z410 1059 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 VN1R5Q7Z5H4 357 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SPRED1Q7Z699 444 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 AFAP1L2Q8N4X5 818 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 ANKRD53Q8N9V6 530 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 FAM181AQ8N9Y4 354 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 HUS1BQ8NHY5 278 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 WDR20Q8TBZ3 569 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SLC22A18Q96BI1 424 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 AHCYL2Q96HN2 611 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 FAR2Q96K12 515 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 MARK4Q96L34 752 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 RILPQ96NA2 401 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 FRG2BQ96QU4 278 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 MAP3K3Q99759 626 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 EFCAB11Q9BUY7 163 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SLC29A3Q9BZD2 475 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 EHD1Q9H4M9 534 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 ELOVL6Q9H5J4 265 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 AKTIPQ9H8T0 292 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 MEAF6Q9HAF1 191 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 TMEM184CQ9NVA4 438 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 HEY2Q9UBP5 337 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 POMT2Q9UKY4 750 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SNX6Q9UNH7 406 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 ENTPD2Q9Y5L3 495 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 SCN3AQ9NY46 2000 aa9.34□□□□□ -0.91
SNRNP40-201ENST00000263694 A0A0J9YY10 115 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SLC9B1P1A6NJY1 282 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TRPC5OSA6NMA1 111 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 A8MU76 341 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 H0YIV9 168 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ZW10O43264 779 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 HCRTR1O43613 425 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CTSVO60911 334 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 PEX11AO75192 247 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CCNDBP1O95273 360 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ETHE1O95571 254 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 TGFB1P01137 390 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 KRT6AP02538 564 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 KRT6BP04259 564 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SERPIND1P05546 499 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ZNF883P0CG24 379 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CDH3P22223 829 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 CSF2RBP32927 897 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 BCL6P41182 706 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 KRT6CP48668 564 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 INHBCP55103 352 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 RPS13P62277 151 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 ABATP80404 500 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 IFT88Q13099 833 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 NR1D2Q14995 579 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SUZ12Q15022 739 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 HIST2H2ACQ16777 129 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 SLC5A12Q1EHB4 618 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 GALNTL6Q49A17 601 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 XKR7Q5GH72 579 aa9.33□□□□□ -0.92
SNRNP40-201ENST00000263694 HIST2H2AA3Q6FI13 130 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms