RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SRSF5Q13243 272 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 PTGR1Q14914 329 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 PLCL1Q15111 1095 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 LYSMD4Q5XG99 296 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 APOLD1Q96LR9 279 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 MRPL1Q9BYD6 325 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 ADGRE2Q9UHX3 823 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 TP53BP1Q12888 1972 aaPredicted RBP21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 TNRC6BQ9UPQ9 1833 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 FAM221BA6H8Z2 402 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 PCSK2P16519 638 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 POLR2JP52435 117 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 PHEXP78562 749 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 KIR2DS3Q14952 304 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 RBBP5Q15291 538 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SF1Q15637 639 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SLC9B2Q86UD5 537 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 RBM12BQ8IXT5 1001 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 DSELQ8IZU8 1212 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 FBXL6Q8N531 539 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 ANKRD53Q8N9V6 530 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 ZNF548Q8NEK5 533 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 FLVCR1-AS1Q8TAF5 88 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 MCUR1Q96AQ8 359 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 MMADHCQ9H3L0 296 aaPredicted RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 TDRD6O60522 2096 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 ISM1B1AKI9 464 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 B4DGG1 531 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SDC1P18827 310 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 CMPK1P30085 196 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SERPINB1P30740 379 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 PGM1P36871 562 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 KCNK10P57789 538 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 NOXRED1Q6NXP6 359 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 FAM20CQ8IXL6 584 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SDR16C5Q8N3Y7 309 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 CHTF18Q8WVB6 975 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SLC22A18Q96BI1 424 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 SPDL1Q96EA4 605 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 TMEM184CQ9NVA4 438 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 NMRK1Q9NWW6 199 aa21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 RUVBL1Q9Y265 456 aaKnown RBP21.98■■□□□ 1.11
SMARCB1-201ENST00000263121 YY2O15391 372 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 AQP9O43315 295 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 HRH2P25021 359 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 DHPSP49366 369 aaPredicted RBP21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 ACSM2AQ08AH3 577 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 TEAD4Q15561 434 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 MMEL1Q495T6 779 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 VPS26BQ4G0F5 336 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 SPIN4Q56A73 249 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 COQ5Q5HYK3 327 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 KIAA1614Q5VZ46 1190 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 ACSM2BQ68CK6 577 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 C16orf89Q6UX73 402 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 RETREG3Q86VR2 466 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 DEFB107AQ8IZN7 70 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 FAM9CQ8IZT9 166 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 SERPINI1Q99574 410 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 ERVMER34-1Q9H9K5 563 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 SIRT5Q9NXA8 310 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 NDE1Q9NXR1 346 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 BAIAP2L1Q9UHR4 511 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 NDUFAF1Q9Y375 327 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 GON4LQ3T8J9 2241 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 SPAG17Q6Q759 2223 aa21.97■■□□□ 1.11
SMARCB1-201ENST00000263121 A0A1B0GTW7 788 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 A0A1B0GVT2 93 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 A0A1W2PP18 115 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 TRBC2A0A5B9 178 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 FEZF1A0PJY2 475 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 LMO7DNF2Z398 122 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 MRASO14807 208 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 ELF3P78545 371 aaPredicted RBP21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 HHEXQ03014 270 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 ART3Q13508 389 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 ZNF425Q6IV72 752 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 HACD2Q6Y1H2 254 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 TMEM26Q6ZUK4 368 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 PGAM4Q8N0Y7 254 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 ARHGAP24Q8N264 748 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 DTWD2Q8NBA8 298 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 DPH7Q9BTV6 452 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 THTPAQ9BU02 230 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 FBXO4Q9UKT5 387 aa21.96■■□□□ 1.11
SMARCB1-201ENST00000263121 DYTNA2CJ06 578 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 ASPDHA6ND91 283 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 ANKDD1BA6NHY2 528 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 ANGPT2O15123 496 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 SH3BGRLO75368 114 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 PIAS2O75928 621 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 TBX6O95947 436 aaPredicted RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 TGFB1P01137 390 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 TACR1P25103 407 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 CLDN8P56748 225 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 RAE1P78406 368 aaKnown RBP21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 PLK5Q496M5 336 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 ADCK2Q7Z695 626 aa21.95■■□□□ 1.1
SMARCB1-201ENST00000263121 C1orf52Q8N6N3 182 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms