RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 KIAA1614Q5VZ46 1190 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 LCTLQ6UWM7 567 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 DBX2Q6ZNG2 339 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 GPRIN3Q6ZVF9 776 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 CDYL2Q8N8U2 506 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 AVL9Q8NBF6 648 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 EVA1BQ9NVM1 165 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 HCN4Q9Y3Q4 1203 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 DYRK1BQ9Y463 629 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 KCNE2Q9Y6J6 123 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 IGKV1-8A0A0C4DH67 115 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 TPD52L2O43399 206 aaKnown RBP26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 VHLP40337 213 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 GRK6P43250 576 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 DAB2P98082 770 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 XKR6Q5GH73 641 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 USP53Q70EK8 1073 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 EFL1Q7Z2Z2 1120 aaKnown RBP26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 SLC5A11Q8WWX8 675 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 ZNF382Q96SR6 550 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 ACTR8Q9H981 624 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 UCK1Q9HA47 277 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 SLC6A20Q9NP91 592 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 SH3GLB1Q9Y371 365 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 PCDHB11Q9Y5F2 797 aa26.45■■□□□ 1.82
SMARCD3-201ENST00000262188 FFAR3O14843 346 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 NVLO15381 856 aaKnown RBP26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 GPR42O15529 346 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 PRAMEF10O60809 474 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 EDF1O60869 148 aaKnown RBP26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 MLYCDO95822 493 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 PVRP15151 417 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 GFERP55789 205 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 DOC2AQ14183 400 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 MUM1Q2TAK8 710 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 CGB2Q6NT52 195 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 SLCO4C1Q6ZQN7 724 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 MILR1Q7Z6M3 343 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 OOSP2Q86WS3 158 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 OR2L3Q8NG85 312 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 LRMDAQ9H2I8 198 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 STK38LQ9Y2H1 464 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 IGHV1OR21-1A0A087WYE8 117 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 H7BY64 318 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 IRF8Q02556 426 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 METTL2BQ6P1Q9 378 aaKnown RBP26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 C17orf64Q86WR6 236 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 ZNF740Q8NDX6 193 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 CNDP2Q96KP4 475 aaKnown RBP26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 PRAP1Q96NZ9 151 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 CENPKQ9BS16 269 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 TRMOQ9BU70 441 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 DCLRE1BQ9H816 532 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 PCDHGB2Q9Y5G2 931 aa26.44■■□□□ 1.82
SMARCD3-201ENST00000262188 A8MUI8 341 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 UNC5CO95185 931 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 OTCP00480 354 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 HOXB3P14651 431 aaPredicted RBP26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 CAPZBP47756 277 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 CFHR1Q03591 330 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 CPSF6Q16630 551 aaKnown RBP eCLIP26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 ADNP2Q6IQ32 1131 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 SPRED1Q7Z699 444 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 PLD3Q8IV08 490 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 GATA6Q92908 595 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 PPP1R36Q96LQ0 422 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 C7orf26Q96N11 449 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 HBEGFQ99075 208 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 TWSG1Q9GZX9 223 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 ILKAPQ9H0C8 392 aaPredicted RBP26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 ABCG4Q9H172 646 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 EML4Q9HC35 981 aaKnown RBP26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 TMEM9Q9P0T7 183 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 KLHL3Q9UH77 587 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 RAP2CQ9Y3L5 183 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 PTGDR2Q9Y5Y4 395 aa26.43■■□□□ 1.82
SMARCD3-201ENST00000262188 ESRRBO95718 433 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 JUNP05412 331 aaKnown RBP26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 SERPINB5P36952 375 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 NHLH1Q02575 133 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 PRDX1Q06830 199 aaKnown RBP26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CNPY1Q3B7I2 92 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 FAM92BQ6ZTR7 304 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CCDC3Q9BQI4 270 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 HAUS8Q9BT25 410 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 MRPS30Q9NP92 439 aaKnown RBP26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 TMED5Q9Y3A6 229 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 FAM221BA6H8Z2 402 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 FLRT2O43155 660 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 LRP3O75074 770 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CAPN1P07384 714 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CKMT1AP12532 417 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CSF2RBP32927 897 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 PRKAA1Q13131 559 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 KIR2DS3Q14952 304 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 SCIMPQ6UWF3 145 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 ADCK2Q7Z695 626 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 CRLF3Q8IUI8 442 aa26.42■■□□□ 1.82
SMARCD3-201ENST00000262188 RNF175Q8N4F7 328 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms