RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TMEM181Q9P2C4 612 aa8.79□□□□□ -1
CKAP2-201ENST00000258607 VPS29Q9UBQ0 182 aa8.79□□□□□ -1
CKAP2-201ENST00000258607 STON1Q9Y6Q2 735 aa8.79□□□□□ -1
CKAP2-201ENST00000258607 ELOVL7A1L3X0 281 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 FAM234BA2RU67 622 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 AREL1O15033 823 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 YY2O15391 372 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ZSCAN9O15535 394 aaPredicted RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 FRS3O43559 492 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SGTAO43765 313 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ZNF189O75820 626 aaPredicted RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 NFATC1O95644 943 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 OLFM2O95897 454 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 HSMCR30P0CW71 290 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 PVRP15151 417 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 HRH2P25021 359 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 FEN1P39748 380 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 PFN3P60673 137 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 HOXC5Q00444 222 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 PDGFRLQ15198 375 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SMN1Q16637 294 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 OGFOD2Q6N063 350 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 AMZ2Q86W34 360 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 HORMAD1Q86X24 394 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 TICAM1Q8IUC6 712 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ZDHHC13Q8IUH4 622 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 EPHX4Q8IUS5 362 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SNRNP27Q8WVK2 155 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 ASB16Q96NS5 453 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ADI1Q9BV57 179 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 QRSL1Q9H0R6 528 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 ZNF385DQ9H6B1 395 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 IL20RAQ9UHF4 553 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 CDC14AQ9UNH5 594 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 WDR37Q9Y2I8 494 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SPTA1P02549 2419 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SMIM30A4D0T7 59 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 STX16O14662 325 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 PRNPP04156 253 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ANXA6P08133 673 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 PIM1P11309 404 aaPredicted RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 USP39Q53GS9 565 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 FGD3Q5JSP0 725 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 COX20Q5RI15 118 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ATAT1Q5SQI0 421 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 AAGABQ6PD74 315 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ZFAND4Q86XD8 727 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 DHRSXQ8N5I4 330 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 AMER3Q8N944 861 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 OSCP1Q8WVF1 389 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 GTF2H4Q92759 462 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 YIPF2Q9BWQ6 316 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 HEATR5BQ9P2D3 2071 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 J3KTA2 159 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SDC3O75056 442 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SOX14O95416 240 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ACTR1BP42025 376 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 GALK1P51570 392 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 INHBCP55103 352 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ACTR1AP61163 376 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 SLC14A2Q15849 920 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 NNATQ16517 81 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 WSCD2Q2TBF2 565 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 LIN52Q52LA3 116 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 FAM98BQ52LJ0 330 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 C9orf64Q5T6V5 341 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 CPTPQ5TA50 214 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 ERN2Q76MJ5 926 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 ADGRG5Q8IZF4 528 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 TMEM102Q8N9M5 508 aaPredicted RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 CCM2Q9BSQ5 444 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 KCNK12Q9HB15 430 aa8.78□□□□□ -1
CKAP2-201ENST00000258607 THG1LQ9NWX6 298 aaKnown RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 C6orf203Q9P0P8 240 aaPredicted RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 FAF1Q9UNN5 650 aaPredicted RBP8.78□□□□□ -1
CKAP2-201ENST00000258607 A0A0J9YVX5 310 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 LINC00854A0A1B0GVQ3 168 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-201ENST00000258607 SERPINI2O75830 405 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 CYP7B1O75881 506 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 EPN2O95208 641 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 KLF8O95600 359 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-201ENST00000258607 FGF4P08620 206 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 LINC00271P0C7V0 271 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 ACADMP11310 421 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 HOXB2P14652 356 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 PFKLP17858 780 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 ACSL1P33121 698 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 CSRP3P50461 194 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 SUOXP51687 545 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 CDKN3Q16667 212 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 C5orf22Q49AR2 442 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 NHSL2Q5HYW2 709 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 GHDCQ8N2G8 530 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 GATA6Q92908 595 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 ANKRD27Q96NW4 1050 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 ASB2Q96Q27 587 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 TRIM15Q9C019 465 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 PRSS16Q9NQE7 514 aa8.77□□□□□ -1.01
CKAP2-201ENST00000258607 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms