RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FAM155BO75949 473 aa21.86■■□□□ 1.09
LSM4-201ENST00000252816 ILF2Q12905 390 aaKnown RBP21.86■■□□□ 1.09
LSM4-201ENST00000252816 USP10Q14694 798 aaKnown RBP21.86■■□□□ 1.09
LSM4-201ENST00000252816 TSNQ15631 228 aaKnown RBP21.86■■□□□ 1.09
LSM4-201ENST00000252816 SHISA6Q6ZSJ9 500 aa21.86■■□□□ 1.09
LSM4-201ENST00000252816 PPM1NQ8N819 430 aa21.86■■□□□ 1.09
LSM4-201ENST00000252816 ATL1Q8WXF7 558 aa21.86■■□□□ 1.09
LSM4-201ENST00000252816 COL26A1Q96A83 441 aa21.86■■□□□ 1.09
LSM4-201ENST00000252816 UNKQ9C0B0 810 aaKnown RBP21.86■■□□□ 1.09
LSM4-201ENST00000252816 SOX17Q9H6I2 414 aaPredicted RBP21.86■■□□□ 1.09
LSM4-201ENST00000252816 FEZF1A0PJY2 475 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 CEACAM4O75871 244 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 SLC12A2P55011 1212 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 RPS15AP62244 130 aaKnown RBP21.85■■□□□ 1.09
LSM4-201ENST00000252816 EFTUD2Q15029 972 aaKnown RBP eCLIP21.85■■□□□ 1.092e-11■■■■■ 29.6
LSM4-201ENST00000252816 GARNL3Q5VVW2 1013 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 MED25Q71SY5 747 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 SPATA6LQ8N4H0 392 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 TMEM102Q8N9M5 508 aaPredicted RBP21.85■■□□□ 1.09
LSM4-201ENST00000252816 IP6K3Q96PC2 410 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 HAUS8Q9BT25 410 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 SLC25A23Q9BV35 468 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 MLXIPLQ9NP71 852 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 P4HTMQ9NXG6 502 aa21.85■■□□□ 1.09
LSM4-201ENST00000252816 MRPS2Q9Y399 296 aaKnown RBP21.85■■□□□ 1.09
LSM4-201ENST00000252816 KCNE1BA0A087WTH5 132 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 PYCARD-AS1I3L0S3 204 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 MASP2O00187 686 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 TXNDC9O14530 226 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 FOXS1O43638 330 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 LCMT2O60294 686 aaKnown RBP21.84■■□□□ 1.09
LSM4-201ENST00000252816 TUBB4AP04350 444 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 STX2P32856 288 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 BCL6P41182 706 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 COLEC12Q5KU26 742 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 ASB18Q6ZVZ8 466 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 MNS1Q8NEH6 495 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 ABHD11Q8NFV4 315 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 MVB12AQ96EY5 273 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 TSPAN17Q96FV3 270 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 MACROD1Q9BQ69 325 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 DERL2Q9GZP9 239 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 CTNNAL1Q9UBT7 734 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 OARD1Q9Y530 152 aa21.84■■□□□ 1.09
LSM4-201ENST00000252816 PCDHGA9Q9Y5G4 932 aaKnown RBP21.84■■□□□ 1.09
LSM4-201ENST00000252816 A6NL46 340 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 J3QKU1 62 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 KIF2AO00139 706 aaPredicted RBP21.83■■□□□ 1.09
LSM4-201ENST00000252816 FBLP22087 321 aaKnown RBP21.83■■□□□ 1.09
LSM4-201ENST00000252816 MMP11P24347 488 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 GMPRP36959 345 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 RRADP55042 308 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 CDKL1Q00532 357 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 ZKSCAN8Q15776 578 aaPredicted RBP21.83■■□□□ 1.09
LSM4-201ENST00000252816 DCAF10Q5QP82 559 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 UBAP2Q5T6F2 1119 aaKnown RBP21.83■■□□□ 1.09
LSM4-201ENST00000252816 GRTP1Q5TC63 336 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 ATG14Q6ZNE5 492 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 ADAMTSL2Q86TH1 951 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 AMER3Q8N944 861 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 FDCSPQ8NFU4 85 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 OR4K1Q8NGD4 311 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 STT3BQ8TCJ2 826 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 THAP11Q96EK4 314 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 DRC3Q9H069 523 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 ZNF282Q9UDV7 671 aaPredicted RBP21.83■■□□□ 1.09
LSM4-201ENST00000252816 NXT1Q9UKK6 140 aaKnown RBP21.83■■□□□ 1.09
LSM4-201ENST00000252816 CDC14AQ9UNH5 594 aa21.83■■□□□ 1.09
LSM4-201ENST00000252816 TNRC6AQ8NDV7 1962 aaKnown RBP21.82■■□□□ 1.08
LSM4-201ENST00000252816 IGLV3-12A0A075B6K2 115 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 A0A0A6YYC8 382 aaPredicted RBP21.82■■□□□ 1.08
LSM4-201ENST00000252816 CTAGE15A4D2H0 777 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 I3L1I5 382 aaPredicted RBP21.82■■□□□ 1.08
LSM4-201ENST00000252816 PEX12O00623 359 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 FFAR3O14843 346 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 GPR42O15529 346 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 ZGLP1P0C6A0 271 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 CTAGE8P0CG41 777 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 CCDC166P0CW27 439 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 STMN1P16949 149 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 SPRP35270 261 aaPredicted RBP21.82■■□□□ 1.08
LSM4-201ENST00000252816 SLC26A3P40879 764 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 CCR8P51685 355 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 MEF2AQ02078 507 aaPredicted RBP21.82■■□□□ 1.08
LSM4-201ENST00000252816 DSG2Q14126 1118 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 VWA2Q5GFL6 755 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 CATSPEREQ5SY80 951 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 CTAGE6Q86UF2 777 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 CTAGE4Q8IX94 777 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 PRSS58Q8IYP2 241 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 NEIL2Q969S2 332 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 TM4SF19Q96DZ7 209 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 TSNARE1Q96NA8 513 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 TRIM4Q9C037 500 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 HS3ST3B1Q9Y662 390 aa21.82■■□□□ 1.08
LSM4-201ENST00000252816 SOCS6O14544 535 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 ANXA5P08758 320 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 PGDP52209 483 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 RAB10P61026 200 aa21.81■■□□□ 1.08
LSM4-201ENST00000252816 OCA2Q04671 838 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms