RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SMIM11AP58511 58 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 IL20RBQ6UXL0 311 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 NXPE1Q8N323 547 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CYB5D2Q8WUJ1 264 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 KXD1Q9BQD3 176 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PAK1IP1Q9NWT1 392 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 PCM1Q15154 2024 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 FUOMA2VDF0 154 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 IMPDH1P20839 514 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CDCA2Q69YH5 1023 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 TMEM220Q6QAJ8 160 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SVOPLQ8N434 492 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MAPK15Q8TD08 544 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 AP2M1Q96CW1 435 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ERMAPQ96PL5 475 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 SPATA5L1Q9BVQ7 753 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 TMEM59LQ9UK28 342 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ABCC6O95255 1503 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 RFPL1O75677 317 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 AHCYP23526 432 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ST3GAL4Q11206 333 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 HEPACAMQ14CZ8 416 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 DESI1Q6ICB0 168 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 HID1Q8IV36 788 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 AGBL3Q8NEM8 1001 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SLC35B2Q8TB61 432 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 C8orf48Q96LL4 319 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 KCTD7Q96MP8 289 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ZCCHC2Q9C0B9 1178 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 TPT1P8Q9HAU6 139 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ITGB1BP2Q9UKP3 347 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MED31Q9Y3C7 131 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MYH14Q7Z406 1995 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ATRNO75882 1429 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 KIAA0513O60268 411 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 LCKP06239 509 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PTPN9P43378 593 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 BTN3A2P78410 334 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 GARNL3Q5VVW2 1013 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SLC8B1Q6J4K2 584 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 EIF2S3LQ2VIR3 472 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CENPMQ9NSP4 180 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MARCH4Q9P2E8 410 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 PADI2Q9Y2J8 665 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CLIC1O00299 241 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MS4A2Q01362 244 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OR2T5Q6IEZ7 315 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 HAGHLQ6PII5 290 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 GATSQ8NAP1 163 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OR2T29Q8NH02 315 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CLP1Q92989 425 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 SLC22A1O15245 554 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SLC26A2P50443 739 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PTGR1Q14914 329 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 TMEM39AQ9NV64 488 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 FAM118AQ9NWS6 357 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 NOP16Q9Y3C1 178 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 FAM86C2PA6NEL3 165 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OXTRP30559 389 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SPAM1P38567 509 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CACNG1Q06432 222 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 BATFQ16520 125 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CMTR2Q8IYT2 770 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 PQLC3Q8N755 202 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 NECTIN4Q96NY8 510 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 FUNDC2Q9BWH2 189 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OR51I1Q9H343 314 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SPTAN1Q13813 2472 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 LOC730098B7Z3J9 87 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PCDH7O60245 1069 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PRKACBP22694 351 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 GABRR2P28476 465 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 HOXD12P35452 270 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 FGL2Q14314 439 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 C1orf189Q5VU69 101 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ENDOVQ8N8Q3 282 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 OR51G2Q8NGK0 314 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PEX13Q92968 403 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ELF4Q99607 663 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ZNF225Q9UK10 706 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ILVBLA1L0T0 632 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 PRMT5O14744 637 aaPredicted RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ATE1O95260 518 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 FGBP02675 491 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 OLR1P78380 273 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SLC25A25Q6KCM7 469 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 ZC3HC1Q86WB0 502 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 CLEC4DQ8WXI8 215 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 SSU72Q9NP77 194 aaKnown RBP7.32□□□□□ -1.24
RIF1-201ENST00000243326 ACSL6Q9UKU0 697 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 CORO2BQ9UQ03 480 aa7.32□□□□□ -1.24
RIF1-201ENST00000243326 MANBAO00462 879 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MATN3O15232 486 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ABCB7O75027 752 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 NDST3O95803 873 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CSKP41240 450 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 PPIL2Q13356 520 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 MAB21L1Q13394 359 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms