RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GTDC1Q4AE62 458 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 FAM98BQ52LJ0 330 aaKnown RBP22.42■■□□□ 1.18
MSX2-201ENST00000239243 ADNP2Q6IQ32 1131 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 HORMAD1Q86X24 394 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 MICU2Q8IYU8 434 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 SMRP1Q8NCR6 262 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 CXorf40BQ96DE9 158 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 INPP5KQ9BT40 448 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 UGT2B28Q9BY64 529 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 FZD4Q9ULV1 537 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 PRR23AA6NEV1 266 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 KLF8O95600 359 aaPredicted RBP22.41■■□□□ 1.18
MSX2-201ENST00000239243 EGFP01133 1207 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 CCT8P50990 548 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 CHN2P52757 468 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 ABHD18Q0P651 414 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 LRRC74AQ0VAA2 488 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 SFSWAPQ12872 951 aaKnown RBP22.41■■□□□ 1.18
MSX2-201ENST00000239243 GCNT7Q6ZNI0 430 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 CHST15Q7LFX5 561 aaPredicted RBP22.41■■□□□ 1.18
MSX2-201ENST00000239243 CAMKMTQ7Z624 323 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 CALHM3Q86XJ0 350 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 VPS37AQ8NEZ2 397 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 OR7A2PQ8NGA2 310 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 CDC26Q8NHZ8 85 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 FAM110BQ8TC76 370 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 FIG4Q92562 907 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 KLK6Q92876 244 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 IL17FQ96PD4 163 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 PANX1Q96RD7 426 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 NUMA1Q14980 2115 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 GNG14A0A1W2PPG7 69 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 A0A1W2PQF6 199 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 EVPLLA8MZ36 301 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 PCDH7O60245 1069 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 ADAM23O75077 832 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 HOXB6P17509 224 aaKnown RBP22.41■■□□□ 1.18
MSX2-201ENST00000239243 CLCNKAP51800 687 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 PCM1Q15154 2024 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 ATP6AP1Q15904 470 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 TMTC4Q5T4D3 741 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 CAPRIN2Q6IMN6 1127 aaKnown RBP22.41■■□□□ 1.18
MSX2-201ENST00000239243 C17orf64Q86WR6 236 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 ZNF576Q9H609 170 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 C8orf33Q9H7E9 229 aaPredicted RBP22.41■■□□□ 1.18
MSX2-201ENST00000239243 SLC6A13Q9NSD5 602 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 ADGRE2Q9UHX3 823 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 PLAGL1Q9UM63 463 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 NCKAP1Q9Y2A7 1128 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 SLC17A4Q9Y2C5 497 aa22.41■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3DA0A087WVF3 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3IA0A087WXS9 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3EA0A087X179 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3KA0A087X1G2 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3FA6NER0 549 aaPredicted RBP22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3LB9A6J9 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 FPGTO14772 594 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 LDLRP01130 860 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3HP0C7X1 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 RAP2AP10114 183 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 CXCR2P25025 360 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 GRSF1Q12849 480 aaKnown RBP eCLIP22.4■■□□□ 1.18
MSX2-201ENST00000239243 PON2Q15165 354 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 ANXA8L1Q5VT79 327 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3GQ6DHY5 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3CQ6IPX1 549 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 TBC1D3Q8IZP1 549 aaPredicted RBP22.4■■□□□ 1.18
MSX2-201ENST00000239243 GPR156Q8NFN8 814 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 ASB12Q8WXK4 309 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 RNF145Q96MT1 663 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 SEPHS2Q99611 448 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 PELI2Q9HAT8 420 aa22.4■■□□□ 1.18
MSX2-201ENST00000239243 CXCR6O00574 342 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 ACP5P13686 325 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 CKMT2P17540 419 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 MRPS21P82921 87 aaKnown RBP22.39■■□□□ 1.18
MSX2-201ENST00000239243 CHRNB3Q05901 458 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 ZNF763Q0D2J5 394 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 CPTPQ5TA50 214 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 UGT2A3Q6UWM9 527 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 TMIGD1Q6UXZ0 262 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 USP30Q70CQ3 517 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 SMPDL3AQ92484 453 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 REXO5Q96IC2 774 aaKnown RBP22.39■■□□□ 1.18
MSX2-201ENST00000239243 BDH2Q9BUT1 245 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 DUSP26Q9BV47 211 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 CHID1Q9BWS9 393 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 PIAS3Q9Y6X2 628 aa22.39■■□□□ 1.18
MSX2-201ENST00000239243 CACNB4O00305 520 aaPredicted RBP22.39■■□□□ 1.17
MSX2-201ENST00000239243 GSNP06396 782 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 ZCCHC18P0CG32 403 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 BMP8BP34820 402 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 IGFALSP35858 605 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 RPL3P39023 403 aaKnown RBP22.39■■□□□ 1.17
MSX2-201ENST00000239243 CDKN2CP42773 168 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 C6orf52Q5T4I8 152 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 PHACTR4Q8IZ21 702 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 ST13P4Q8IZP2 240 aaPredicted RBP22.39■■□□□ 1.17
MSX2-201ENST00000239243 FAM162AQ96A26 154 aa22.39■■□□□ 1.17
MSX2-201ENST00000239243 SLC29A1Q99808 456 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms