RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SLC15A4Q8N697 577 aa8□□□□□ -1.13
APOB-201ENST00000233242 COQ8AQ8NI60 647 aa8□□□□□ -1.13
APOB-201ENST00000233242 PBDC1Q9BVG4 233 aa8□□□□□ -1.13
APOB-201ENST00000233242 GIMAP1-GIMAP5A0A087WTJ2 511 aa8□□□□□ -1.13
APOB-201ENST00000233242 A0A1W2PRB8 838 aa8□□□□□ -1.13
APOB-201ENST00000233242 GRXCR2A6NFK2 248 aa8□□□□□ -1.13
APOB-201ENST00000233242 KRT33AO76009 404 aa8□□□□□ -1.13
APOB-201ENST00000233242 OAS1P00973 400 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 POU4F2Q12837 409 aa8□□□□□ -1.13
APOB-201ENST00000233242 FRG2Q64ET8 278 aa8□□□□□ -1.13
APOB-201ENST00000233242 NOXA1Q86UR1 476 aa8□□□□□ -1.13
APOB-201ENST00000233242 SIDT2Q8NBJ9 832 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 SLC22A17Q8WUG5 538 aa8□□□□□ -1.13
APOB-201ENST00000233242 TCTEX1D2Q8WW35 142 aa8□□□□□ -1.13
APOB-201ENST00000233242 GATA6Q92908 595 aa8□□□□□ -1.13
APOB-201ENST00000233242 FRG2BQ96QU4 278 aa8□□□□□ -1.13
APOB-201ENST00000233242 MKRN2Q9H000 416 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 ZNF700Q9H0M5 742 aa8□□□□□ -1.13
APOB-201ENST00000233242 ARID1AO14497 2285 aa8□□□□□ -1.13
APOB-201ENST00000233242 FLRT2O43155 660 aa8□□□□□ -1.13
APOB-201ENST00000233242 POP4O95707 220 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 CDK6Q00534 326 aa8□□□□□ -1.13
APOB-201ENST00000233242 EEF1DP3Q658K8 133 aa8□□□□□ -1.13
APOB-201ENST00000233242 OR6K6Q8NGW6 343 aa8□□□□□ -1.13
APOB-201ENST00000233242 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 EQTNQ9NQ60 294 aa8□□□□□ -1.13
APOB-201ENST00000233242 SMOXQ9NWM0 555 aa8□□□□□ -1.13
APOB-201ENST00000233242 CACNB4O00305 520 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 PCDH7O60245 1069 aa8□□□□□ -1.13
APOB-201ENST00000233242 CYB5AP00167 134 aa8□□□□□ -1.13
APOB-201ENST00000233242 ADORA2AP29274 412 aa8□□□□□ -1.13
APOB-201ENST00000233242 CLCA4Q14CN2 919 aa8□□□□□ -1.13
APOB-201ENST00000233242 SAMD7Q7Z3H4 446 aa8□□□□□ -1.13
APOB-201ENST00000233242 COMMD7Q86VX2 200 aa8□□□□□ -1.13
APOB-201ENST00000233242 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
APOB-201ENST00000233242 SAMD12Q8N8I0 201 aa8□□□□□ -1.13
APOB-201ENST00000233242 DCBLD1Q8N8Z6 715 aa8□□□□□ -1.13
APOB-201ENST00000233242 ATP6V1C2Q8NEY4 427 aa8□□□□□ -1.13
APOB-201ENST00000233242 EBPLQ9BY08 206 aa8□□□□□ -1.13
APOB-201ENST00000233242 PCDHA2Q9Y5H9 948 aa8□□□□□ -1.13
APOB-201ENST00000233242 COLEC10Q9Y6Z7 277 aa8□□□□□ -1.13
APOB-201ENST00000233242 CAPN5O15484 640 aaPredicted RBP8□□□□□ -1.13
APOB-201ENST00000233242 FAM163BP0C2L3 166 aa8□□□□□ -1.13
APOB-201ENST00000233242 MADCAM1Q13477 382 aa8□□□□□ -1.13
APOB-201ENST00000233242 TCEAL6Q6IPX3 200 aa8□□□□□ -1.13
APOB-201ENST00000233242 IL31RAQ8NI17 732 aa8□□□□□ -1.13
APOB-201ENST00000233242 PPTC7Q8NI37 304 aa8□□□□□ -1.13
APOB-201ENST00000233242 OR8D1Q8WZ84 308 aa8□□□□□ -1.13
APOB-201ENST00000233242 PLD4Q96BZ4 506 aa8□□□□□ -1.13
APOB-201ENST00000233242 SLC32A1Q9H598 525 aa8□□□□□ -1.13
APOB-201ENST00000233242 CLDN4O14493 209 aa8□□□□□ -1.13
APOB-201ENST00000233242 UPK1BO75841 260 aa8□□□□□ -1.13
APOB-201ENST00000233242 ZNF20P17024 532 aa8□□□□□ -1.13
APOB-201ENST00000233242 SP140Q13342 867 aa8□□□□□ -1.13
APOB-201ENST00000233242 MSANTD2Q6P1R3 559 aa8□□□□□ -1.13
APOB-201ENST00000233242 ZSWIM9Q86XI8 627 aa8□□□□□ -1.13
APOB-201ENST00000233242 LILRB4Q8NHJ6 448 aa8□□□□□ -1.13
APOB-201ENST00000233242 ENPP5Q9UJA9 477 aa8□□□□□ -1.13
APOB-201ENST00000233242 MYH1P12882 1939 aa8□□□□□ -1.13
APOB-201ENST00000233242 MYH4Q9Y623 1939 aa8□□□□□ -1.13
APOB-201ENST00000233242 FAAHO00519 579 aa8□□□□□ -1.13
APOB-201ENST00000233242 OAZ2O95190 189 aa8□□□□□ -1.13
APOB-201ENST00000233242 IFNA2P01563 188 aa8□□□□□ -1.13
APOB-201ENST00000233242 ZNF823P16415 610 aa8□□□□□ -1.13
APOB-201ENST00000233242 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
APOB-201ENST00000233242 NUDT13Q86X67 352 aa8□□□□□ -1.13
APOB-201ENST00000233242 CADM2Q8N3J6 435 aa8□□□□□ -1.13
APOB-201ENST00000233242 OR2L8Q8NGY9 312 aa8□□□□□ -1.13
APOB-201ENST00000233242 ARL6Q9H0F7 186 aa8□□□□□ -1.13
APOB-201ENST00000233242 MRPL17Q9NRX2 175 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 MED31Q9Y3C7 131 aa8□□□□□ -1.13
APOB-201ENST00000233242 PRSS51A0A1B0GVH4 220 aa8□□□□□ -1.13
APOB-201ENST00000233242 PRAF2O60831 178 aa8□□□□□ -1.13
APOB-201ENST00000233242 RNASEH2AO75792 299 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 RPS3AP61247 264 aaKnown RBP8□□□□□ -1.13
APOB-201ENST00000233242 TUSC3Q13454 348 aa8□□□□□ -1.13
APOB-201ENST00000233242 LCN8Q6JVE9 175 aa8□□□□□ -1.13
APOB-201ENST00000233242 PIP5K1AQ99755 562 aa8□□□□□ -1.13
APOB-201ENST00000233242 TMED9Q9BVK6 235 aa8□□□□□ -1.13
APOB-201ENST00000233242 MANBAO00462 879 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 KLHL26Q53HC5 615 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 SLC2A7Q6PXP3 512 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 RD3Q7Z3Z2 195 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 SPATA22Q8NHS9 363 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 CD300LFQ8TDQ1 290 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 NPAP1Q9NZP6 1156 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 SPATA31A5Q5VU36 1347 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 SPATA31A7Q8IWB4 1347 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 SLC1A7O00341 560 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 TLX2O43763 284 aaPredicted RBP7.99□□□□□ -1.13
APOB-201ENST00000233242 PAHP00439 452 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 CSF2P04141 144 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 CHRM1P11229 460 aaPredicted RBP7.99□□□□□ -1.13
APOB-201ENST00000233242 RFC2P35250 354 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 ASPAP45381 313 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 HSPB3Q12988 150 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 TMCO2Q7Z6W1 182 aaPredicted RBP7.99□□□□□ -1.13
APOB-201ENST00000233242 SHKBP1Q8TBC3 707 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 CHFRQ96EP1 664 aa7.99□□□□□ -1.13
APOB-201ENST00000233242 NECAB3Q96P71 396 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms