RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 GLULP15104 373 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CD9P21926 228 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 TACR1P25103 407 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CDKN2CP42773 168 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC11A2P49281 568 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ALDH6A1Q02252 535 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF404Q494X3 552 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM205BPQ63HN1 556 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CES5AQ6NT32 575 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 NCEH1Q6PIU2 408 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF517Q6ZMY9 492 aaPredicted RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 NRARPQ7Z6K4 114 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 C11orf96Q7Z7L8 435 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CYP4Z1Q86W10 505 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR8H1Q8NGG4 311 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SOCS4Q8WXH5 440 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 MUL1Q969V5 352 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 MSANTD3Q96H12 275 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZBTB18Q99592 522 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 RBM4BQ9BQ04 359 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 RBM4Q9BWF3 364 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 NMRK2Q9NPI5 230 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 DCAF13Q9NV06 445 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 MARCH5Q9NX47 278 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SCN3BQ9NY72 215 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 OGDHLQ9ULD0 1010 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 RWDD3Q9Y3V2 267 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 TNPO3Q9Y5L0 923 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ISPDA4D126 451 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CLDN11O75508 207 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SERPINI2O75830 405 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 LRATO95237 230 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 EPHA2P29317 976 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 GNPDA1P46926 289 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF157P51786 506 aaPredicted RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 RAB25P57735 213 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CACNG1Q06432 222 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CDONQ4KMG0 1287 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CARD16Q5EG05 197 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 PLEKHM3Q6ZWE6 761 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CEP68Q76N32 757 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 PHC2Q8IXK0 858 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ADGRG2Q8IZP9 1017 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 NLGN4XQ8N0W4 816 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 LSMEM1Q8N8F7 131 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 PDLIM5Q96HC4 596 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 EGLN2Q96KS0 407 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 Q96MT0 163 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 UCK2Q9BZX2 261 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CLPBQ9H078 707 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ASB8Q9H765 288 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 WWOXQ9NZC7 414 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF224Q9NZL3 707 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 PKP3Q9Y446 797 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 HSPB11Q9Y547 144 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 H7C0S8 307 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 RGS14O43566 566 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 STC2O76061 302 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 EOMESO95936 686 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 BCKDHAP12694 445 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CD6P30203 668 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CHRNEQ04844 493 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CDK5R2Q13319 367 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CRHR2Q13324 411 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ARHGEF6Q15052 776 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF691Q5VV52 312 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 TUBA3EQ6PEY2 450 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 UBE2FQ969M7 185 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SIPA1Q96FS4 1042 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 TSSK3Q96PN8 268 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 GFM1Q96RP9 751 aaKnown RBP9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CD244Q9BZW8 370 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CLMPQ9H6B4 373 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 LRTM1Q9HBL6 345 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SERHLQ9NQF3 203 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 OPTCQ9UBM4 332 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ATP6V1G2-DDX39BF2Z307 99 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SMLR1H3BR10 107 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SEPT4O43236 478 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 CCNYL3P0C7X3 344 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 HMGCLP35914 325 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 FLT3LGP49771 235 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLAMF1Q13291 335 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ARHGEF7Q14155 803 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZXDCQ2QGD7 858 aaPredicted RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 USP39Q53GS9 565 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 DPY19L3Q6ZPD9 716 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 RAB43Q86YS6 212 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 EID3Q8N140 333 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM109AQ8N4B1 249 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 RNF175Q8N4F7 328 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 CAMKK1Q8N5S9 505 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 GRPEL2Q8TAA5 225 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 TRNT1Q96Q11 434 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 DHRS9Q9BPW9 319 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 TIGARQ9NQ88 270 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 TMEM45AQ9NWC5 275 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 USE1Q9NZ43 259 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms