RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 PTPRSQ13332 1948 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 PLXNB3Q9ULL4 1909 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 TAF4O00268 1085 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 AIREO43918 545 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 EPN2O95208 641 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 C9P02748 559 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 AMD1P17707 334 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 GPX2P18283 190 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 AP1S1P61966 158 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 ZNF181Q2M3W8 571 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 TUBA3EQ6PEY2 450 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 ZNF783Q6ZMS7 281 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 GPR155Q7Z3F1 870 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 HTRA1Q92743 480 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 TRIM43Q96BQ3 446 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 ARMC5Q96C12 935 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 DPH2Q9BQC3 489 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 VPS51Q9UID3 782 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 RNF6Q9Y252 685 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 PCDHGA6Q9Y5G7 932 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 BACE2Q9Y5Z0 518 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 PABPN1LA6NDY0 278 aaKnown RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 AGAP5A6NIR3 686 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 M0R082 166 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 SCAMP3O14828 347 aaKnown RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 OXSR1O95747 527 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 TRBC1P01850 177 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 CBSLP0DN79 551 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 CSF2RAP15509 400 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 CBSP35520 551 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 CSNK2BP67870 215 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 ZXDCQ2QGD7 858 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 CDKL4Q5MAI5 379 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 ZNF362Q5T0B9 420 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 C1QTNF12Q5T7M4 302 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 PDE12Q6L8Q7 609 aaKnown RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 NOXRED1Q6NXP6 359 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 TTC23LQ6PF05 361 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 NXPE1Q8N323 547 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 CPA6Q8N4T0 437 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 HRASLS5Q96KN8 279 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 COPS4Q9BT78 406 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 EBPLQ9BY08 206 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 GABARAPL3Q9BY60 117 aa16.92■□□□□ 0.3
PRPF19-201ENST00000227524 AFF4Q9UHB7 1163 aaKnown RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 NUP214P35658 2090 aaPredicted RBP16.92■□□□□ 0.3
PRPF19-201ENST00000227524 SAGE2PA6NJ88 616 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 NPIPB8E9PQR5 432 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 K7ERQ8 282 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 TBL1XO60907 577 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 ACPPP15309 386 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 GADD45AP24522 165 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 HNF1BP35680 557 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 WNT3P56703 355 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 ABRQ12979 859 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 CDKN3Q16667 212 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 UGT8Q16880 541 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 IQCCQ4KMZ1 466 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
PRPF19-201ENST00000227524 CYP2U1Q7Z449 544 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 TXNDC15Q96J42 360 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 EPYCQ99645 322 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.91■□□□□ 0.36e-8■□□□□ 9
PRPF19-201ENST00000227524 ERVK-11Q9UQG0 969 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 MAGEB17A8MXT2 336 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 TBX1O43435 398 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 PCSK2P16519 638 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 PRPS1L1P21108 318 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 SPAM1P38567 509 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 CTSKP43235 329 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 TBCEQ15813 527 aaPredicted RBP16.91■□□□□ 0.3
PRPF19-201ENST00000227524 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 DEPDC1Q5TB30 811 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 STEAP3Q658P3 488 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 ZNF621Q6ZSS3 439 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 P3H2Q8IVL5 708 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 SLC39A11Q8N1S5 342 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 L3MBTL4Q8NA19 623 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 C19orf43Q9BQ61 176 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 C11orf49Q9H6J7 331 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 POU2F3Q9UKI9 436 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 UGT2A1Q9Y4X1 527 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 OR51B4Q9Y5P0 310 aa16.91■□□□□ 0.3
PRPF19-201ENST00000227524 LAMA3Q16787 3333 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 ABHD14A-ACY1A0A1B0GW23 586 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 DPM1O60762 260 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 SCN2BO60939 215 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 VIPP01282 170 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 SOD2P04179 222 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 GSSP48637 474 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 ELP6Q0PNE2 266 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 ATAD3BQ5T9A4 648 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 COL13A1Q5TAT6 717 aaPredicted RBP16.9■□□□□ 0.3
PRPF19-201ENST00000227524 GPR153Q6NV75 609 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 NEK5Q6P3R8 708 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 Q6ZPB1 254 aaPredicted RBP16.9■□□□□ 0.3
PRPF19-201ENST00000227524 USP43Q70EL4 1123 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
PRPF19-201ENST00000227524 SYT12Q8IV01 421 aa16.9■□□□□ 0.3
PRPF19-201ENST00000227524 PAF1Q8N7H5 531 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms