RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Speer4cG3UXD1 256 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Obox5G3X9P6 291 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gm10354K7N6A0 256 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gja4P28235 333 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Lrrc3P59034 257 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mkl2P59759 1080 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 A4galtQ67BJ4 359 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Krt72Q6IME9 520 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tnpo3Q6P2B1 923 aaKnown RBP13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Sdr16c5Q7TQA3 309 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Olfr845Q7TRG2 312 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ifi44Q8BV66 422 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Defb36Q8K3U4 67 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Serpinb11Q9CQV3 388 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Chaf1bQ9D0N7 572 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 PacrglQ9D3X5 248 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Apbb2Q9DBR4 760 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Hapln2Q9ESM3 341 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Plscr1Q9JJ00 328 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nrg4Q9WTX4 115 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gm7714E9Q079 131 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zfp938E9Q9G3 579 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 NagluO88325 739 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ifngr1P15261 477 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tuba1cP68373 449 aaKnown RBP13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 PamP97467 979 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Olfr616Q3KPB0 317 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 AbrQ5SSL4 859 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Hsd3b5Q61694 373 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Il1rapQ61730 570 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nr6a1Q64249 495 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Kir3dl2Q673W2 388 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cep78Q6IRU7 790 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Rasgrp3Q6NZH9 691 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Chst2Q80WV3 530 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Casp9Q8C3Q9 454 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Rnf219Q8K2Y0 722 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 ZwilchQ8R060 589 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Vmn1r33Q8R2E0 305 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 AcmsdQ8R519 336 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Atp6v1c2Q99L60 427 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Hm13Q9D8V0 378 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tmprss6Q9DBI0 811 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tuba8Q9JJZ2 449 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Plxna2P70207 1894 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 CerklA2AQH1 525 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Adam34A2RSG8 714 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Emp3O35912 163 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Anxa6P14824 673 aaKnown RBP13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 TecP24604 630 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 BgnP28653 369 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Galnt3P70419 633 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Npy2rP97295 381 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zfp791Q497V9 528 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Plk5Q4FZD7 595 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Havcr1Q5QNS5 305 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Wbp4Q61048 376 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fgfr3Q61851 801 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Usp7Q6A4J8 1103 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ckmt2Q6P8J7 419 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Hspa13Q8BM72 471 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Trmt10aQ8C1Z8 328 aaKnown RBP13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 BicralQ8CHH5 1074 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Vmn1r22Q8R2D1 302 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mat1aQ91X83 396 aaKnown RBP13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 NgrnQ99KS2 293 aaKnown RBP13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 EbplQ9D0P0 206 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc5a3Q9JKZ2 718 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 PrepQ9QUR6 710 aa13.01□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Auts2A0A087WPF7 1261 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cylc1A0A1B0GR13 642 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cyp1a1P00184 524 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Adra1bP97717 514 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 MitfQ08874 526 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Abraxas2Q3TCJ1 415 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Znrf3Q5SSZ7 913 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zdhhc20Q5Y5T1 380 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 KdsrQ6GV12 332 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cpsf6Q6NVF9 551 aaKnown RBP13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Wfikkn2Q7TQN3 571 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Wipi2Q80W47 445 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tyw1Q8BJM7 721 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Wdr26Q8C6G8 641 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc29a4Q8R139 528 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Paip2bQ91W45 136 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Spcs2Q9CYN2 226 aaKnown RBP13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Srfbp1Q9CZ91 441 aaKnown RBP13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mapk9Q9WTU6 423 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Tmem235B1AQL3 211 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Zfp992B1ASD8 573 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 H2-M9O19442 342 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 RngttO55236 597 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Cyp8b1O88962 500 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Etv4P28322 485 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 ThrbP37242 461 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nr5a2P45448 560 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gdi1P50396 447 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Prss57Q14B24 284 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Clec12aQ504P2 267 aa13□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Q5EBG8 199 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms