RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Uba1Q02053 1058 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 CblbQ3TTA7 982 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ube2r2Q6ZWZ2 238 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ccdc126Q8BIS8 140 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 ChdhQ8BJ64 596 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Stfa2l1Q8BWM3 103 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cpne5Q8JZW4 593 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Mapre2Q8R001 326 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn1r33Q8R2E0 305 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr606Q8VGZ8 319 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 TrabdQ99JY4 376 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fam32aQ9CR80 112 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 MtpapQ9D0D3 585 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Wwp2Q9DBH0 870 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 AnkhQ9JHZ2 492 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tubd1Q9R1K7 455 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Scn9aQ62205 1984 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Spin2-ps6A0A140T8V2 174 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zfp808B8JJZ4 753 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm10608E9PZ13 166 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zfp384E9Q1A5 584 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cyp21P03940 487 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rgs16P97428 201 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Spata48Q5NC83 441 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr381Q5SSP0 311 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Prkd1Q62101 918 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Atp11bQ6DFW5 1175 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gpr17Q6NS65 339 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 C2cd4bQ80XU5 340 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Slitrk5Q810B7 957 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn1r203Q8R273 311 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Nudt4Q8R2U6 179 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Atp5oQ9DB20 213 aaKnown RBP11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 GabarapQ9DCD6 117 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cmtm7Q9ESD6 167 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ubqln2Q9QZM0 638 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 TesminQ9WTJ6 475 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tcf7l1Q9Z1J1 584 aa11.02□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cd300ld2A2A7W0 305 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Armc4B2RY50 1037 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr287E9PZS7 322 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cbx4O55187 551 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Bmp6P20722 510 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 PuraP42669 321 aaKnown RBP11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 VldlrP98156 873 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm5416Q6IE28 97 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tatdn1Q6P8M1 295 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ppp2r2bQ6ZWR4 443 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Slc16a12Q8BGC3 486 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Nipal2Q91WC7 383 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Myg1Q9JK81 380 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr1006A2ALD2 312 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Mllt3A2AM29 569 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm3159K7N760 267 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rem1O35929 297 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cav3P51637 151 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Padi2Q08642 673 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Itgb8Q0VBD0 767 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Kcna7Q17ST2 489 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Alg10bQ3UGP8 474 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 MagixQ4KL35 324 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zc3h12aQ5D1E7 596 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Chsy3Q5DTK1 884 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tp53i13Q5F267 385 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Adgre1Q61549 931 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr1355Q7TQU9 310 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Klf8Q8BLM0 355 aaKnown RBP11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ints14Q8R3P6 515 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr847Q8VFF4 312 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Pskh1Q91YA2 424 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Use1Q9CQ56 270 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Mri1Q9CQT1 369 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Yae1d1Q9DAY6 216 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Alyref2Q9JJW6 218 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fads2Q9Z0R9 444 aaKnown RBP11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Plxnb2B2RXS4 1842 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ighg3A0A1Y7VJN6 399 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rnf169E9Q7F2 694 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm3755K7N743 167 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tcea1P10711 301 aaKnown RBP11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Sfmbt2Q5DTW2 938 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tmc6Q7TN60 810 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr1128Q7TR47 311 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fam72aQ8BFZ8 149 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Barhl2Q8VIB5 384 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Q91V76 315 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Metap1dQ9CPW9 335 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zbtb32Q9JKD9 465 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Mid2Q9QUS6 705 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tmem236A2ARJ3 344 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tsc22d2E9Q7M2 769 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gpr50O88495 591 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 P01670 111 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 P01671 111 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 P01672 111 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fcgr2P08101 330 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 GzmcP08882 248 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Lingo4Q149C3 593 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 CcnjQ3TZI6 379 aa11.01□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Lmf1Q3U3R4 574 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms