RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 KRT84Q9NSB2 600 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TMPRSS11EQ9UL52 423 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 GPX2P18283 190 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 PRPH2P23942 346 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 GSSP48637 474 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 EIF2B2P49770 351 aaKnown RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 PTSQ03393 145 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 MVKQ03426 396 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 SYT16Q17RD7 645 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 SMUG1Q53HV7 270 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 PRSS36Q5K4E3 855 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 FRG2Q64ET8 278 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TXNDC8Q6A555 127 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 SERPINA13PQ6UXR4 307 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 CYP2U1Q7Z449 544 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 HORMAD1Q86X24 394 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 CRIPAKQ8N1N5 446 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 S100ZQ8WXG8 99 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 ASB11Q8WXH4 323 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 DNASE1L2Q92874 299 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 FRG2BQ96QU4 278 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 COPS8Q99627 209 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 BBS2Q9BXC9 721 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 TMEM184CQ9NVA4 438 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 THUMPD1Q9NXG2 353 aaKnown RBP13.4□□□□□ -0.26
PHGDH-233ENST00000642021 ZDHHC3Q9NYG2 299 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 ERVW-1Q9UQF0 538 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
PHGDH-233ENST00000642021 MTX2O75431 263 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CD36P16671 472 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CD22P20273 847 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 LHCGRP22888 699 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 NPRL3Q12980 569 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 BOP1Q14137 746 aaKnown RBP13.39□□□□□ -0.27
PHGDH-233ENST00000642021 MAPK11Q15759 364 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 GGTA1PQ4G0N0 100 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 RETSATQ6NUM9 610 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CBLL1Q75N03 491 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 ENTHD1Q8IYW4 607 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CBARPQ8N350 705 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-233ENST00000642021 HJURPQ8NCD3 748 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CDC26Q8NHZ8 85 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 NELL1Q92832 810 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 TPD52L3Q96J77 140 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 BCL7BQ9BQE9 202 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 ASPSCR1Q9BZE9 553 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 AMBNQ9NP70 447 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 ZNF451Q9Y4E5 1061 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 OR2A25A4D2G3 310 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CA12O43570 354 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 SH3BGRLO75368 114 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 VIPP01282 170 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 LAMP1P11279 417 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 C21orf33P30042 268 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-233ENST00000642021 LIPAP38571 399 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 CHIT1Q13231 466 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 EIF3MQ7L2H7 374 aaKnown RBP13.39□□□□□ -0.27
PHGDH-233ENST00000642021 LRRC70Q7Z2Q7 622 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 GPR155Q7Z3F1 870 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 NPAS4Q8IUM7 802 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 SYT12Q8IV01 421 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 MAL2Q969L2 176 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 C2orf49Q9BVC5 232 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-233ENST00000642021 ATAD3AQ9NVI7 634 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
PHGDH-233ENST00000642021 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 MAGEB17A8MXT2 336 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 TMEM229AB2RXF0 380 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 AQP9O43315 295 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 CBSLP0DN79 551 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 SELPP16109 830 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 AQP1P29972 269 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 CBSP35520 551 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 STK19P49842 368 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 ADNP2Q6IQ32 1131 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 LINC00299Q6ZSB3 139 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 PRSS48Q7RTY5 328 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 TSEN54Q7Z6J9 526 aaKnown RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 DNAJB7Q7Z6W7 309 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 PHF10Q8WUB8 498 aaKnown RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 MTERF1Q99551 399 aaKnown RBP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 KIF17Q9P2E2 1029 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 CD84Q9UIB8 345 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 SLCO3A1Q9UIG8 710 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.38□□□□□ -0.27
PHGDH-233ENST00000642021 TMED5Q9Y3A6 229 aa13.38□□□□□ -0.27
PHGDH-233ENST00000642021 EPN2O95208 641 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms