RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 IGKV1-8A0A0C4DH67 115 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 SHOX2O60902 331 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-230ENST00000641927 RASSF9O75901 435 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 UROSP10746 265 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 JUPP14923 745 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 HNF4AP41235 474 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 GRIA3P42263 894 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 CCL7P80098 99 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 LAPTM5Q13571 262 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 TBCCQ15814 346 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 HIST2H2ACQ16777 129 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-230ENST00000641927 CCDC157Q569K6 752 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 SNAP47Q5SQN1 464 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 HIST2H2AA3Q6FI13 130 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 GRHL2Q6ISB3 625 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 PLXDC1Q8IUK5 500 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 WDR75Q8IWA0 830 aaKnown RBP16.8■□□□□ 0.28
PHGDH-230ENST00000641927 KIRREL3Q8IZU9 778 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 L3MBTL4Q8NA19 623 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 NSRP1Q9H0G5 558 aaKnown RBP16.8■□□□□ 0.28
PHGDH-230ENST00000641927 NPHS2Q9NP85 383 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 GEMIN8Q9NWZ8 242 aaKnown RBP16.8■□□□□ 0.28
PHGDH-230ENST00000641927 HAO1Q9UJM8 370 aa16.8■□□□□ 0.28
PHGDH-230ENST00000641927 ASCC3Q8N3C0 2202 aaKnown RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 KIF1CO43896 1103 aaKnown RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 NRP2O60462 931 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 SKAP2O75563 359 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 CHEK2O96017 543 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 FGF4P08620 206 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 PCNAP12004 261 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 ACP1P24666 158 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 HRH2P25021 359 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 CXCR2P25025 360 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 CSF2RBP32927 897 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 GRK3P35626 688 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 CASP2P42575 452 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 LSSP48449 732 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 CSNK1G2P78368 415 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 PCDH1Q08174 1060 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 RBBP5Q15291 538 aaKnown RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 ZRSR2Q15696 482 aaKnown RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 PDCD2Q16342 344 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 GGTA1PQ4G0N0 100 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 SGO1Q5FBB7 561 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 TCHHL1Q5QJ38 904 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 KANK2Q63ZY3 851 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 MED27Q6P2C8 311 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 PLD3Q8IV08 490 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 KRT78Q8N1N4 520 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 MTFMTQ96DP5 389 aaKnown RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 WDR34Q96EX3 536 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 PPP1R36Q96LQ0 422 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 MAP3K3Q99759 626 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 NUDT22Q9BRQ3 303 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 EPN3Q9H201 632 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 SPNS1Q9H2V7 528 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 SEMA6CQ9H3T2 930 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 LRRN3Q9H3W5 708 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 ELOVL6Q9H5J4 265 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 TMEM184CQ9NVA4 438 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 ATXN7L1Q9ULK2 861 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 SNX6Q9UNH7 406 aa16.79■□□□□ 0.28
PHGDH-230ENST00000641927 EP300Q09472 2414 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-230ENST00000641927 FEZF1A0PJY2 475 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 FKBP9O95302 570 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TROVE2P10155 538 aaKnown RBP eCLIP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 CFHR1Q03591 330 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 IFT88Q13099 833 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 FIGLAQ6QHK4 219 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 DDIASQ8IXT1 998 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 ZNF740Q8NDX6 193 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 FAR2Q96K12 515 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 CDC6Q99741 560 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TRIM55Q9BYV6 548 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 SLC29A3Q9BZD2 475 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 RAB33BQ9H082 229 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 C1GALT1Q9NS00 363 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TMEM9Q9P0T7 183 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 EPHA6Q9UF33 1036 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 COL5A1P20908 1838 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 RP1P56715 2156 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 KCNE1BA0A087WTH5 132 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 A0A1W2PQM1 296 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 TLCD2A6NGC4 264 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 SLC9B1P1A6NJY1 282 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 A8MU76 341 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 HAT1O14929 419 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 OR1F1O43749 312 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 CBFA2T3O75081 653 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 CPNE6O95741 557 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 KRT6AP02538 564 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 KRT6BP04259 564 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 HOXB3P14651 431 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 ST6GAL1P15907 406 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 KRT6CP48668 564 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 NEK2P51955 445 aa16.78■□□□□ 0.28
PHGDH-230ENST00000641927 DDX39BQ13838 428 aaKnown RBP16.78■□□□□ 0.28
PHGDH-230ENST00000641927 NAA25Q14CX7 972 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms