RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 KRT78Q8N1N4 520 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 C2orf73Q8N5S3 287 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 SMPDL3AQ92484 453 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 STARD8Q92502 1023 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 C11orf24Q96F05 449 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 DUS3LQ96G46 650 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 EGLN2Q96KS0 407 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 SH3GL1Q99961 368 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 EFHD1Q9BUP0 239 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 EBPLQ9BY08 206 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 CARS2Q9HA77 564 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 POLMQ9NP87 494 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 SLC2A4RGQ9NR83 387 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 IMP3Q9NV31 184 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 NDRG2Q9UN36 371 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 PRSS38A1L453 326 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 ETHE1O95571 254 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 ACADSP16219 412 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 CTBSQ01459 385 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 TDGQ13569 410 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 KRT33BQ14525 404 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 LCN8Q6JVE9 175 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 CHTF18Q8WVB6 975 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 HMGB4Q8WW32 186 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 MENTQ9BUN1 341 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 ACAT2Q9BWD1 397 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 KLHL4Q9C0H6 718 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 FGF22Q9HCT0 170 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 GMPR2Q9P2T1 348 aaKnown RBP16.66■□□□□ 0.26
PHGDH-208ENST00000641023 TAC3Q9UHF0 121 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 MAPRE3Q9UPY8 281 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 TSC22D4Q9Y3Q8 395 aa16.66■□□□□ 0.26
PHGDH-208ENST00000641023 PRSS51A0A1B0GVH4 220 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 PDZK1P1A8MUH7 402 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ERN1O75460 977 aaKnown RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 LRATO95237 230 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 CDH1P12830 882 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ATP6V1C1P21283 382 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 CXCR2P25025 360 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 PIK3CBP42338 1070 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ASMTP46597 345 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 CLDN2P57739 230 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 SRSF11Q05519 484 aaKnown RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 PGS1Q32NB8 556 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 UAP1L1Q3KQV9 507 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 CMPK2Q5EBM0 449 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 DUS1LQ6P1R4 473 aaKnown RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ENPP7Q6UWV6 458 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 PGBD3Q8N328 593 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 C1orf52Q8N6N3 182 aaKnown RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 GOLM1Q8NBJ4 401 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 KCNH6Q9H252 994 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 VAPAQ9P0L0 249 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 MYO10Q9HD67 2058 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 PRR19A6NJB7 356 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 HTR1EP28566 365 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 SLC7A1P30825 629 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 KIR3DL1P43629 444 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 NFATC4Q14934 902 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 CLCA4Q14CN2 919 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 MLF2Q15773 248 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 LRRC36Q1X8D7 754 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 IZUMO2Q6UXV1 221 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 MSANTD1Q6ZTZ1 278 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 GFM2Q969S9 779 aaKnown RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ITCHQ96J02 903 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 OR2M4Q96R27 311 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ECSITQ9BQ95 431 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 RAB11FIP5Q9BXF6 653 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 MVB12BQ9H7P6 319 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 COPS7BQ9H9Q2 264 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 DMRT3Q9NQL9 472 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-208ENST00000641023 AP3M1Q9Y2T2 418 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 PLEKHM1Q9Y4G2 1056 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 SNX13Q9Y5W8 968 aa16.65■□□□□ 0.26
PHGDH-208ENST00000641023 ARPC2O15144 300 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 SH3BGRLO75368 114 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 APBB3O95704 486 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 ANXA4P09525 319 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-208ENST00000641023 RAB28P51157 221 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 MTPNP58546 118 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 MEF2AQ02078 507 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-208ENST00000641023 SMAD2Q15796 467 aaKnown RBP16.64■□□□□ 0.25
PHGDH-208ENST00000641023 LPCAT4Q643R3 524 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 GALNT18Q6P9A2 607 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 PROSER1Q86XN7 944 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 FAM129CQ86XR2 697 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 FLCNQ8NFG4 579 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 BMFQ96LC9 184 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 WDR92Q96MX6 357 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 ZNF570Q96NI8 536 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 CAMK1GQ96NX5 476 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 THUMPD3Q9BV44 507 aaKnown RBP16.64■□□□□ 0.25
PHGDH-208ENST00000641023 PELI2Q9HAT8 420 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 PPT2Q9UMR5 302 aa16.64■□□□□ 0.25
PHGDH-208ENST00000641023 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms