RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GDF5P43026 501 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 MSH2P43246 934 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 SLC6A12P48065 614 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 SNRPNP63162 240 aaKnown RBP25.52■■□□□ 1.68
VEGFA-231ENST00000640499 PRTGQ2VWP7 1150 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 C1orf189Q5VU69 101 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 KLHDC8AQ8IYD2 350 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 ARHGEF39Q8N4T4 335 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 ABHD11Q8NFV4 315 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 KIAA1143Q96AT1 154 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-231ENST00000640499 TMEM79Q9BSE2 394 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 ALG9Q9H6U8 611 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 SLC22A11Q9NSA0 550 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 A0A096LPK6 155 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 NCF1BA6NI72 391 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-231ENST00000640499 NCF1CA8MVU1 366 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-231ENST00000640499 KLK3P07288 261 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-231ENST00000640499 HBQ1P09105 142 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 CDH1P12830 882 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 NCF1P14598 390 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-231ENST00000640499 TFEBP19484 476 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 VSNL1P62760 191 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 NFKB2Q00653 900 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 TCTE1Q5JU00 501 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 FAM198BQ6UWH4 519 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 THOC6Q86W42 341 aaKnown RBP25.51■■□□□ 1.67
VEGFA-231ENST00000640499 C17orf64Q86WR6 236 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 GPSM1Q86YR5 675 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 PLD6Q8N2A8 252 aaKnown RBP25.51■■□□□ 1.67
VEGFA-231ENST00000640499 OR4K1Q8NGD4 311 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 ATOH8Q96SQ7 321 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 SLC22A14Q9Y267 594 aa25.51■■□□□ 1.67
VEGFA-231ENST00000640499 A0A087X1B8 175 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 LCMT2O60294 686 aaKnown RBP25.5■■□□□ 1.67
VEGFA-231ENST00000640499 EZRP15311 586 aaKnown RBP25.5■■□□□ 1.67
VEGFA-231ENST00000640499 HRH2P25021 359 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 TYK2P29597 1187 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 SERPINB8P50452 374 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 SERPINB9P50453 376 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 RPS18P62269 152 aaKnown RBP25.5■■□□□ 1.67
VEGFA-231ENST00000640499 FBXO48Q5FWF7 155 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 CATSPEREQ5SY80 951 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 PCSK4Q6UW60 755 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 FRA10AC1Q70Z53 315 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 ADCK2Q7Z695 626 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 TBC1D1Q86TI0 1168 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-231ENST00000640499 TMEM151BQ8IW70 566 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 STARD8Q92502 1023 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 NEIL2Q969S2 332 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 EGFL8Q99944 293 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 HAUS8Q9BT25 410 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 SPNS1Q9H2V7 528 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 NMRAL1Q9HBL8 299 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 IRAK4Q9NWZ3 460 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 ASB1Q9Y576 335 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 ATMQ13315 3056 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 IGSF10Q6WRI0 2623 aa25.5■■□□□ 1.67
VEGFA-231ENST00000640499 EXOC1LA0A1B0GW35 172 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 PABPN1LA6NDY0 278 aaKnown RBP25.49■■□□□ 1.67
VEGFA-231ENST00000640499 C21orf140B9A014 251 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 P2RX6O15547 441 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 KATNA1O75449 491 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 FURINP09958 794 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 MTHFD2P13995 350 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 GGT5P36269 586 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 HNMTP50135 292 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 GRM7Q14831 915 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 ATP1A1-AS1Q5TC04 95 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 FAM69BQ5VUD6 431 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 ADGRD1Q6QNK2 874 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 VN1R4Q7Z5H5 301 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 PDPRQ8NCN5 879 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 ESAMQ96AP7 390 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 C10orf90Q96M02 699 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 NDC1Q9BTX1 674 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 EFHD1Q9BUP0 239 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 GPR87Q9BY21 358 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 SLC7A5P2Q9GIP4 190 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 CUTCQ9NTM9 273 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 ZNF358Q9NW07 568 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.49■■□□□ 1.672e-10■■□□□ 14.1
VEGFA-231ENST00000640499 PTBP2Q9UKA9 531 aaKnown RBP25.49■■□□□ 1.67
VEGFA-231ENST00000640499 SRPK3Q9UPE1 567 aa25.49■■□□□ 1.67
VEGFA-231ENST00000640499 V9GYY5 206 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-231ENST00000640499 CCDC88CQ9P219 2028 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 KCNE1BA0A087WTH5 132 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 FEZF1A0PJY2 475 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 HYKKA2RU49 373 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 TRIM49D1C9J1S8 452 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 KLHL2O95198 593 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 ONECUT2O95948 504 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 EIF2S1P05198 315 aaKnown RBP25.48■■□□□ 1.67
VEGFA-231ENST00000640499 PTPN4P29074 926 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 MEF2AQ02078 507 aaPredicted RBP25.48■■□□□ 1.67
VEGFA-231ENST00000640499 HKDC1Q2TB90 917 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 CDKL4Q5MAI5 379 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 TTLL10Q6ZVT0 673 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 STAG3L4Q8TBR4 150 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 PROKR1Q8TCW9 393 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms