RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PIGFQ07326 219 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 LRRC32Q14392 662 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 ATP13A5Q4VNC0 1218 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 TNFAIP8L3Q5GJ75 292 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 LAPTM4BQ86VI4 370 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 IRF7Q92985 503 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 ASCC3Q8N3C0 2202 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CAPN14A8MX76 684 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 NME4O00746 187 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 ERI3O43414 337 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CBSLP0DN79 551 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CBSP35520 551 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 IST1P53990 364 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 RAPSNQ13702 412 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CXorf57Q6NSI4 855 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 PLET1Q6UQ28 207 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 ADGRG2Q8IZP9 1017 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 HSPBAP1Q96EW2 488 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 KCNS3Q9BQ31 491 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 WDR26Q9H7D7 661 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 THUMPD1Q9NXG2 353 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 MRPL39Q9NYK5 338 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 KCNK6Q9Y257 313 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 OAS3Q9Y6K5 1087 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 A0A1B0GUL6 1792 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 NUP205Q92621 2012 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 GMFGO60234 142 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 SOCS5O75159 536 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 PRDX3P30048 256 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 NCBP2P52298 156 aaKnown RBP eCLIP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 SLC9A5Q14940 896 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 TIGD6Q17RP2 521 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 RNASE12Q5GAN4 147 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CRB2Q5IJ48 1285 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 TAF8Q7Z7C8 310 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 NFKBIDQ8NI38 313 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 TSPEARQ8WU66 669 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 CARS2Q9HA77 564 aaKnown RBP14.01□□□□□ -0.17
SCARB2-216ENST00000639300 HCSTQ9UBK5 93 aa14.01□□□□□ -0.17
SCARB2-216ENST00000639300 FAM240BA0A1B0GVZ2 78 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 BCHEP06276 602 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF30P17039 623 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 TIE1P35590 1138 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 AVPR1BP47901 424 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 ERVPABLB-1P60509 514 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 DSTNP60981 165 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 RAB8AP61006 207 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 FAM189BP81408 668 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 PDGFRLQ15198 375 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 CLEC12AQ5QGZ9 265 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 CEACAM20Q6UY09 585 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 GALNT10Q86SR1 603 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 WFIKKN2Q8TEU8 576 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 RAB8BQ92930 207 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF347Q96SE7 839 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 GPATCH1Q9BRR8 931 aaKnown RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 C11orf84Q9BUA3 381 aaPredicted RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 OR51V1Q9H2C8 321 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 TBC1D17Q9HA65 648 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 NKIRAS2Q9NYR9 191 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 RHCGQ9UBD6 479 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 FOXD2O60548 495 aaPredicted RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 PSIP1O75475 530 aaKnown RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 FPR1P21462 350 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 MYL9P24844 172 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 RPS6KA3P51812 740 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 SPIN4Q56A73 249 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 NPAS3Q8IXF0 933 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 GSTO2Q9H4Y5 243 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 TRIM39Q9HCM9 518 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 SNTG1Q9NSN8 517 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 C6orf47O95873 294 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 PDYNP01213 254 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 C9P02748 559 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 PRR23BQ6ZRT6 265 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 NUDT13Q86X67 352 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 RASSF5Q8WWW0 418 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 AP3S1Q92572 193 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 CMTM7Q96FZ5 175 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 CEP295NLQ96MC4 621 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 SRMSQ9H3Y6 488 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 MRPS30Q9NP92 439 aaKnown RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 SPATA7Q9P0W8 599 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 MTRRQ9UBK8 725 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 WBP11Q9Y2W2 641 aaKnown RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 HCN1O60741 890 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 CPN2P22792 545 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 ENTPD1P49961 510 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 CCR8P51685 355 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 MINDY4Q4G0A6 757 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 IQCCQ4KMZ1 466 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 RBM48Q5RL73 367 aaKnown RBP14□□□□□ -0.17
SCARB2-216ENST00000639300 MINDY1Q8N5J2 469 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 PDPRQ8NCN5 879 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 SEZ6LQ9BYH1 1024 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 TMEM27Q9HBJ8 222 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 TMED5Q9Y3A6 229 aa14□□□□□ -0.17
SCARB2-216ENST00000639300 GJB3O75712 270 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms