RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ATP1A1P05023 1023 aaKnown RBP3.23□□□□□ -1.89
CCDC7-213ENST00000639290 RHOCP08134 193 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 DHRS4L1P0CG22 281 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 KRT9P35527 623 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 CD96P40200 585 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 PIK3CBP42338 1070 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 ARSEP51690 589 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 MESDQ14696 234 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 NPY5RQ15761 445 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 ACER2Q5QJU3 275 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF585AQ6P3V2 769 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 PGBD2Q6P3X8 592 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 SYT10Q6XYQ8 523 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 TRIM72Q6ZMU5 477 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 SYDE1Q6ZW31 735 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-213ENST00000639290 LMNTD1Q8N9Z9 388 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF540Q8NDQ6 660 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCDC7-213ENST00000639290 POMGNT1Q8WZA1 660 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 ARHGEF2Q92974 986 aaKnown RBP3.23□□□□□ -1.89
CCDC7-213ENST00000639290 BRF1Q92994 677 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 KIAA1191Q96A73 305 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 NUS1Q96E22 293 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 MVB12AQ96EY5 273 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 MYEOVQ96EZ4 313 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 CENPOQ9BU64 300 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 TRAF4Q9BUZ4 470 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-213ENST00000639290 FAIMQ9NVQ4 179 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 ELOVL5Q9NYP7 299 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 NKIRAS2Q9NYR9 191 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 VPS54Q9P1Q0 977 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 CCDC39Q9UFE4 941 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 COQ6Q9Y2Z9 468 aa3.23□□□□□ -1.89
CCDC7-213ENST00000639290 CD8B2A6NJW9 211 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PES1O00541 588 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 SART1O43290 800 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 B3GALT2O43825 422 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ZMPSTE24O75844 475 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 NEURL1O76050 574 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 BCL10O95999 233 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CSTBP04080 98 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 UGT2B4P06133 528 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 HNRNPCP07910 306 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF23P17027 643 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 EPHA1P21709 976 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PTPN6P29350 595 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CCR1P32246 355 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 LSP1P33241 339 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 HTR7P34969 479 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ECI1P42126 302 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CCR8P51685 355 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CASP5P51878 434 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CLNS1AP54105 237 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PNLIPRP1P54315 467 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ARL4CP56559 192 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GPR85P60893 370 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PHC1P78364 1004 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ALCAMQ13740 583 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 UGP2Q16851 508 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 WDR72Q3MJ13 1102 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ITPRIPL1Q6GPH6 555 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 RFX8Q6ZV50 586 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 TRAPPC11Q7Z392 1133 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 MRPL41Q8IXM3 137 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GPALPP1Q8IXQ4 340 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CMIPQ8IY22 773 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 SIRT6Q8N6T7 355 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 LSMEM1Q8N8F7 131 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 LRTOMTQ8WZ04 291 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CYFIP2Q96F07 1278 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 TMEM41AQ96HV5 264 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 RSRC1Q96IZ7 334 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ZSCAN31Q96LW9 406 aaPredicted RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CYP3A43Q9HB55 503 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PLAC1Q9HBJ0 212 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GP6Q9HCN6 339 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 SOHLH2Q9NX45 425 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GALNT8Q9NY28 637 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 C6orf203Q9P0P8 240 aaPredicted RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 TESQ9UGI8 421 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ANKRD12Q6UB98 2062 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 DNAH7Q8WXX0 4024 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 IGLV3-12A0A075B6K2 115 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GOLGA6L10A0A0M3HER8 536 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GOLGA6L10A6NI86 522 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 GOLGA6L19H0YKK7 550 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 EIF3FO00303 357 aaPredicted RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 SOCS5O75159 536 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 SLC25A12O75746 678 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 DEXIO95424 95 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 EML2O95834 649 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 IGSF6O95976 241 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ALOX5P09917 674 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ELFN1P0C7U0 828 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CXCR2P25025 360 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 RPL13P26373 211 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 TXKP42681 527 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 RPL21P46778 160 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PREPP48147 710 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CLK1P49759 484 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms