RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZNF547Q8IVP9 402 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 TERB1Q8NA31 727 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 DMTF1Q9Y222 760 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 TBC1D3BA6NDS4 549 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 SCN2BO60939 215 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 PAPLNO95428 1278 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 C1QCP02747 245 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 FSHRP23945 695 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 TRPC1P48995 793 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 HNRNPFP52597 415 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 LBX1P52954 281 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 IST1P53990 364 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 RAE1P78406 368 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 LAPTM5Q13571 262 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 DAG1Q14118 895 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 CAPN13Q6MZZ7 669 aaPredicted RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 ANKRD26P1Q6NSI1 321 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 CRTC3Q6UUV7 619 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 SLCO4C1Q6ZQN7 724 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 ERN2Q76MJ5 926 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 PATL1Q86TB9 770 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 CLEC4FQ8N1N0 589 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 C1orf52Q8N6N3 182 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 LMNTD1Q8N9Z9 388 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 MUC22E2RYF6 1773 aaPredicted RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 EVPLLA8MZ36 301 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 ALBP02768 609 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 ZNF8P17098 575 aaPredicted RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 TUBA4AP68366 448 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 ADARB1P78563 741 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 STARD3Q14849 445 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 ZDHHC13Q8IUH4 622 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 OR8J2Q8NGG1 315 aa20.78■□□□□ 0.92
CLN6-224ENST00000638076 METTL2AQ96IZ6 378 aaKnown RBP20.78■□□□□ 0.92
CLN6-224ENST00000638076 G3V2T6 193 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 GNGT2O14610 69 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 POP7O75817 140 aaKnown RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 ALPLP05186 524 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 IL12RB1P42701 662 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ROR2Q01974 943 aaKnown RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 ZIK1Q3SY52 487 aaPredicted RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLN6-224ENST00000638076 TMEM52BQ4KMG9 183 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 CATSPEREQ5SY80 951 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 MED27Q6P2C8 311 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ABRAXAS1Q6UWZ7 409 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ZNF621Q6ZSS3 439 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 USP51Q70EK9 711 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ZFAND2BQ8WV99 257 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 SUSD6Q92537 303 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ERVK-11Q9UQG0 969 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 SH2B3Q9UQQ2 575 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 CLIC1O00299 241 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 LAMP1P11279 417 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 NPPBP16860 134 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ENGP17813 658 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 RPS13P62277 151 aaKnown RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 E2F2Q14209 437 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 NFE2L1Q14494 772 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 BORAQ6PGQ7 559 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 CLECL1Q8IZS7 167 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 GPR156Q8NFN8 814 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 CXorf40AQ8TE69 158 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 SDCCAG3Q96C92 435 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 ZNF514Q96K75 400 aaPredicted RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 LINC00615Q96LM1 132 aaPredicted RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 SFXN1Q9H9B4 322 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 FAM120CQ9NX05 1096 aaKnown RBP20.77■□□□□ 0.92
CLN6-224ENST00000638076 BTBD3Q9Y2F9 522 aa20.77■□□□□ 0.92
CLN6-224ENST00000638076 H0YAE9 185 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 SCAMP2O15127 329 aaKnown RBP20.76■□□□□ 0.91
CLN6-224ENST00000638076 YY2O15391 372 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 CPSF4O95639 269 aaKnown RBP20.76■□□□□ 0.91
CLN6-224ENST00000638076 ANXA4P09525 319 aaPredicted RBP20.76■□□□□ 0.91
CLN6-224ENST00000638076 P2RY2P41231 377 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 ALDH3B2P48448 385 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 C21orf58P58505 322 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 CES5AQ6NT32 575 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 SERPINA11Q86U17 422 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 OR10Q1Q8NGQ4 319 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 OR9A1PQ8NGU1 263 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 CHTF18Q8WVB6 975 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 TMIGD2Q96BF3 282 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 SAMD11Q96NU1 681 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 MAGIXQ9H6Y5 334 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 C17orf113A0A1B0GUU1 675 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 H3BSA7 217 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 EPN2O95208 641 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 EPHX1P07099 455 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 EFNA1P20827 205 aaPredicted RBP20.76■□□□□ 0.91
CLN6-224ENST00000638076 PLCL1Q15111 1095 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 DUSP6Q16828 381 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 HKDC1Q2TB90 917 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 SPIN4Q56A73 249 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 PLA2G15Q8NCC3 412 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 OR2L2Q8NH16 312 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 HIC2Q96JB3 615 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 DUSP26Q9BV47 211 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 GPR34Q9UPC5 381 aa20.76■□□□□ 0.91
CLN6-224ENST00000638076 TMEM98Q9Y2Y6 226 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms