RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SCIMPQ6UWF3 145 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 SLC9B2Q86UD5 537 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 FAM129CQ86XR2 697 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 MAML2Q8IZL2 1156 aaPredicted RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 OR7G3Q8NG95 312 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 CEP192Q8TEP8 1941 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 SLC7A6OSQ96CW6 309 aaPredicted RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 CMTM7Q96FZ5 175 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 HBEGFQ99075 208 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 AIF1LQ9BQI0 150 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 FARSBQ9NSD9 589 aaKnown RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.79□□□□□ -0.04
CLN6-219ENST00000637329 GEMIN8Q9NWZ8 242 aaKnown RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 ZIM2Q9NZV7 527 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 CPNE7Q9UBL6 633 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 TNRC6BQ9UPQ9 1833 aaKnown RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 SH2B3Q9UQQ2 575 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 RRP15Q9Y3B9 282 aaKnown RBP14.79□□□□□ -0.04
CLN6-219ENST00000637329 GPR45Q9Y5Y3 372 aa14.79□□□□□ -0.04
CLN6-219ENST00000637329 BBIP1A8MTZ0 92 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 PRICKLE3O43900 615 aaPredicted RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 LMNAP02545 664 aaKnown RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 GNSP15586 552 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 GPX3P22352 226 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 CNR2P34972 360 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 HOXD12P35452 270 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 RPL38P63173 70 aaKnown RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 CSTF1Q05048 431 aaKnown RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 PRDX1Q06830 199 aaKnown RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 ZNF528Q3MIS6 628 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 DNAL1Q4LDG9 190 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 CATSPEREQ5SY80 951 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 CACHD1Q5VU97 1274 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 LAYNQ6UX15 382 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 TMEM105Q8N8V8 129 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 DTWD2Q8NBA8 298 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 ZNF548Q8NEK5 533 aaPredicted RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 OR4K1Q8NGD4 311 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 OR2A1Q8NGT9 310 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 SLC37A2Q8TED4 501 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 TSPEARQ8WU66 669 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 FCRL1Q96LA6 429 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 RTKNQ9BST9 563 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 SLC25A23Q9BV35 468 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 SRMSQ9H3Y6 488 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 UCK1Q9HA47 277 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 NMRK1Q9NWW6 199 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 GIMAP2Q9UG22 337 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 G3BP2Q9UN86 482 aaKnown RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 EIF3LQ9Y262 564 aaKnown RBP14.78□□□□□ -0.04
CLN6-219ENST00000637329 FANCMQ8IYD8 2048 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 DMDP11532 3685 aa14.78□□□□□ -0.04
CLN6-219ENST00000637329 CACNA1GO43497 2377 aa14.77□□□□□ -0.04
CLN6-219ENST00000637329 DYTNA2CJ06 578 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 LMO7DNF2Z398 122 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 AQP9O43315 295 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 CELA2BP08218 269 aaPredicted RBP14.77□□□□□ -0.05
CLN6-219ENST00000637329 CMPK1P30085 196 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 HMGCS1Q01581 520 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 GPR18Q14330 331 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 PLCL1Q15111 1095 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 RPS6KA2Q15349 733 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 TCEA2Q15560 299 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 ZNF423Q2M1K9 1284 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 SPIN4Q56A73 249 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 ZNF542PQ5EBM4 170 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 SGO1Q5FBB7 561 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 PEAR1Q5VY43 1037 aaPredicted RBP14.77□□□□□ -0.05
CLN6-219ENST00000637329 TMIGD1Q6UXZ0 262 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 ARMCX6Q7L4S7 300 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 SNX32Q86XE0 403 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 KIAA2013Q8IYS2 634 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 NAGSQ8N159 534 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 LMNTD1Q8N9Z9 388 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 TTLQ8NG68 377 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 ZDHHC1Q8WTX9 485 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 NELL1Q92832 810 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 BTBD10Q9BSF8 475 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 ACAT2Q9BWD1 397 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 RHBGQ9H310 441 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 XKR8Q9H6D3 395 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 DMRT3Q9NQL9 472 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 NDE1Q9NXR1 346 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 ANKMY1Q9P2S6 941 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 VPS29Q9UBQ0 182 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 POLR3HQ9Y535 204 aaPredicted RBP14.77□□□□□ -0.05
CLN6-219ENST00000637329 ENTPD2Q9Y5L3 495 aa14.77□□□□□ -0.05
CLN6-219ENST00000637329 DMXL1Q9Y485 3027 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 SEC22BO75396 215 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 SNRPB2P08579 225 aaKnown RBP14.76□□□□□ -0.05
CLN6-219ENST00000637329 PRPS2P11908 318 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 PCNAP12004 261 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 SDHBP21912 280 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 JAK1P23458 1154 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 PSMB5P28074 263 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 PEBP1P30086 187 aaKnown RBP14.76□□□□□ -0.05
CLN6-219ENST00000637329 CTSKP43235 329 aa14.76□□□□□ -0.05
CLN6-219ENST00000637329 FASLGP48023 281 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms