RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 RPL38P63173 70 aaKnown RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 FOXK2Q01167 660 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 PWP1Q13610 501 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 CPSF6Q16630 551 aaKnown RBP eCLIP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 RFTN2Q52LD8 501 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 SGO1Q5FBB7 561 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 RAET1GQ6H3X3 334 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 ANKRD54Q6NXT1 300 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 VITQ6UXI7 678 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 MBOAT1Q6ZNC8 495 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 PROSER1Q86XN7 944 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 APLFQ8IW19 511 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 SLC22A15Q8IZD6 547 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 AADATQ8N5Z0 425 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 TMEM125Q96AQ2 219 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 VPS33AQ96AX1 596 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 ELSPBP1Q96BH3 223 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 METTL2AQ96IZ6 378 aaKnown RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 LINC00615Q96LM1 132 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 SH3GL1Q99961 368 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 KCTD14Q9BQ13 255 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHAC1Q9H158 963 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 NKX2-4Q9H2Z4 354 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 SLC28A3Q9HAS3 691 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 ZNHIT2Q9UHR6 403 aa6.94□□□□□ -1.3
BRCA1-230ENST00000634433 CNOT11Q9UKZ1 510 aaKnown RBP6.94□□□□□ -1.3
BRCA1-230ENST00000634433 TCF20Q9UGU0 1960 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 H3BM21 787 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 NME4O00746 187 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 INPP4BO15327 924 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGA12O60330 932 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 GMNNO75496 209 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 KAT7O95251 611 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 KCNH1O95259 989 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 EPHX1P07099 455 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 UMPSP11172 480 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 JUPP14923 745 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 UQCRBP14927 111 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 IL12AP29459 219 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 GJA4P35212 333 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 OPRD1P41143 372 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 HNF4AP41235 474 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ZFP36L2P47974 494 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CTSCP53634 463 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 IRF8Q02556 426 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDH1Q08174 1060 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 BLMHQ13867 455 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 TIGD2Q4W5G0 525 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 LPCAT4Q643R3 524 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 LCN8Q6JVE9 175 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CES5AQ6NT32 575 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 RNF111Q6ZNA4 994 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 MMAAQ8IVH4 418 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 BEND7Q8N7W2 519 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 TNIP2Q8NFZ5 429 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 POP5Q969H6 163 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 TEX37Q96LM6 180 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PBX4Q9BYU1 374 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 OSBPL6Q9BZF3 934 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 COPS7BQ9H9Q2 264 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ARMC1Q9NVT9 282 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CMTM6Q9NX76 183 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 LMCD1Q9NZU5 365 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CNOT6Q9ULM6 557 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 SLC22A14Q9Y267 594 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGB2Q9Y5G2 931 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGA9Q9Y5G4 932 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGA8Q9Y5G5 932 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGA6Q9Y5G7 932 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGA3Q9Y5H0 932 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PCDHGA2Q9Y5H1 932 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PLXNA2O75051 1894 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 KCNE1BA0A087WTH5 132 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 OTOL1A6NHN0 477 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ARHGEF33A8MVX0 844 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PRR33A8MZF0 331 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 H0YJX3 145 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 FXYD1O00168 92 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ANKRD28O15084 1053 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 HNRNPRO43390 633 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 MMP20O60882 483 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PDYNP01213 254 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 GPIP06744 558 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 HSD3B1P14060 373 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PEX2P28328 305 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 HTR1EP28566 365 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CSTF3Q12996 717 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CHIT1Q13231 466 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 MED21Q13503 144 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CAPRIN1Q14444 709 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ITPRIPL2Q3MIP1 535 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PAGE3Q5JUK9 113 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 C6orf10Q5SRN2 563 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ZNF648Q5T619 568 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 FAM219BQ5XKK7 198 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 FRG2Q64ET8 278 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 RAB12Q6IQ22 244 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ANO7Q6IWH7 933 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 NANOGP8Q6NSW7 305 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms