RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 RAD54LQ92698 747 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 DAZLQ92904 295 aaKnown RBP4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 ABTB1Q969K4 478 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 CABS1Q96KC9 395 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 C1QTNF7Q9BXJ2 289 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 FKRPQ9H9S5 495 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 MID1IP1Q9NPA3 183 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 KLHL9Q9P2J3 617 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 TXNDC16Q9P2K2 825 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 ACAD8Q9UKU7 415 aa4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 SPIN1Q9Y657 262 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC9-216ENST00000634178 BDP1A6H8Y1 2624 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 PDS5AQ29RF7 1337 aaKnown RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 A0A1W2PPW3 197 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 FEZF1A0PJY2 475 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 HYKKA2RU49 373 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 PROB1E7EW31 1015 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 FAM86B1E9PN63 330 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 EIF3DO15371 548 aaKnown RBP eCLIP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 C9P02748 559 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 FAM86B2P0C5J1 330 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 SPP1P10451 314 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 EEF2P13639 858 aaKnown RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 GM2AP17900 193 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 CBLP22681 906 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 PCYT1AP49585 367 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 TPD52P55327 224 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 ST8SIA6P61647 398 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 RPS18P62269 152 aaKnown RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 PPIL2Q13356 520 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 TNK1Q13470 666 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 ETFDHQ16134 617 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 CCDC152Q4G0S7 254 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 DDX60LQ5H9U9 1706 aaKnown RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 CCDC158Q5M9N0 1113 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 GRTP1Q5TC63 336 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 NDUFAF5Q5TEU4 345 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 PACS1Q6VY07 963 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 COPS6Q7L5N1 327 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 TMPRSS12Q86WS5 348 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 NUDT13Q86X67 352 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 CREBRFQ8IUR6 639 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 CLIP4Q8N3C7 705 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 L3MBTL4Q8NA19 623 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 DHX58Q96C10 678 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 BSCL2Q96G97 398 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 SCMH1Q96GD3 660 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 CDHR1Q96JP9 859 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 DEFB118Q96PH6 123 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 PCYT2Q99447 389 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 KLHL1Q9NR64 748 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 DNAJC17Q9NVM6 304 aaKnown RBP4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 TMEM161AQ9NX61 479 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 WNT16Q9UBV4 365 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 MOSPD1Q9UJG1 213 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 NUDCQ9Y266 331 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 MYH3P11055 1940 aa4.76□□□□□ -1.65
TRAPPC9-216ENST00000634178 DOCK3Q8IZD9 2030 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 KERAO60938 352 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 KDM4BO94953 1096 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 CRYABP02511 175 aaKnown RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 PTMAP06454 111 aaKnown RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 CSN3P07498 182 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 SNRNP70P08621 437 aaKnown RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 LINC00271P0C7V0 271 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 MYOD1P15172 320 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 FOSL2P15408 326 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 EPCAMP16422 314 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 CYP11B2P19099 503 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 SCP2P22307 547 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 AHRP35869 848 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 IL15P40933 162 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 CASP3P42574 277 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 RGS7P49802 495 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 KHKP50053 298 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 MMP15P51511 669 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 MFAP3P55082 362 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 AP1B1Q10567 949 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 MYBPHQ13203 477 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 TAZQ16635 292 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 DUOXA1Q1HG43 343 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 TXNRD3NBQ6F5E7 133 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 RHBDF2Q6PJF5 856 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 C15orf52Q6ZUT6 534 aaKnown RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 KMT5CQ86Y97 462 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 PTOV1Q86YD1 416 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 FOXP4Q8IVH2 680 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 FAM219AQ8IW50 185 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 OR8H1Q8NGG4 311 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 B4GALNT2Q8NHY0 566 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 UBLCP1Q8WVY7 318 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 KRT35Q92764 455 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 MYADMQ96S97 322 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 HNRNPABQ99729 332 aaKnown RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 NTPCRQ9BSD7 190 aaKnown RBP4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 ACAT2Q9BWD1 397 aa4.75□□□□□ -1.65
TRAPPC9-216ENST00000634178 SEZ6LQ9BYH1 1024 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms