RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TACR2P21452 398 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 DDX6P26196 483 aaKnown RBP eCLIP4.69□□□□□ -1.664e-7■□□□□ 9.8
SDCBP-213ENST00000630925 APOBEC3AP31941 199 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 KIR3DL2P43630 455 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CSNK1DP48730 415 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ARL4DP49703 201 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RAB9AP51151 201 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 COPB1P53618 953 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 EMP2P54851 167 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TNNC1P63316 161 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 SLC15A2Q16348 729 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 UGCGQ16739 394 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ATP13A5Q4VNC0 1218 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PDCD4Q53EL6 469 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MARCH8Q5T0T0 291 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MFSD14CQ5VZR4 134 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ATG9BQ674R7 924 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 GDF6Q6KF10 455 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 FIGNL1Q6PIW4 674 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RTL4Q6ZR62 310 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ANO5Q75V66 913 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 EIF3MQ7L2H7 374 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF551Q7Z340 670 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 LUZP2Q86TE4 346 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PAQR7Q86WK9 346 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MCOLN2Q8IZK6 566 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 FUKQ8N0W3 1084 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TTC9BQ8N6N2 239 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 OR4A15Q8NGL6 344 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PHYHIPQ92561 330 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RAD54LQ92698 747 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 REPS1Q96D71 796 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ARHGEF26Q96DR7 871 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 AJUBAQ96IF1 538 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PLEKHA8Q96JA3 519 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 HIST1H2AHQ96KK5 128 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 EGLN2Q96KS0 407 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MRGPRX2Q96LB1 330 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 Q96M66 194 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TAAR6Q96RI8 345 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 NPAS2Q99743 824 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 HIST1H2AJQ99878 128 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TMEM246Q9BRR3 403 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 HAPLN2Q9GZV7 340 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 NSUN3Q9H649 340 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TMEM231Q9H6L2 316 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 WDR76Q9H967 626 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ANKRA2Q9H9E1 313 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 GBA2Q9HCG7 927 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CSNK1G1Q9HCP0 422 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CHST11Q9NPF2 352 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PIGVQ9NUD9 493 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 GTSE1Q9NYZ3 720 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MTCH1Q9NZJ7 389 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MARCH2Q9P0N8 246 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 APOBEC3BQ9UH17 382 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ADAM28Q9UKQ2 775 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RAB21Q9UL25 225 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 GPR132Q9UNW8 380 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 DTX4Q9Y2E6 619 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PLLPQ9Y342 182 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RBMX2Q9Y388 322 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PAPPAQ13219 1627 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RRBP1Q9P2E9 1410 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 POLR3AO14802 1390 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CPDO75976 1380 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 METP08581 1390 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 DHX57Q6P158 1386 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 A0A0B4J293 547 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PLSCR5A0PG75 271 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PGRMC1O00264 195 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 DLL1O00548 723 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 KLF11O14901 512 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 KDELR3O43731 214 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 SERPINA6P08185 405 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PLEKP08567 350 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 UBTFL1P0CB47 393 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PNMTP11086 282 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 DGKAP23743 735 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 EPHB2P29323 1055 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 FMO4P31512 558 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 THBS4P35443 961 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 SLC19A1P41440 591 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CXCR3P49682 368 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CLK3P49761 638 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 SERPINB9P50453 376 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 WDR4P57081 412 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 UBE2G2P60604 165 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CSNK2A1P68400 391 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MXRA7P84157 204 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ZFP36L1Q07352 338 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ACSM2AQ08AH3 577 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 SIGLEC14Q08ET2 396 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 FUT7Q11130 342 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 BNIP3Q12983 259 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 DRAP1Q14919 205 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 RUNDC3AQ59EK9 446 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PCID2Q5JVF3 399 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 TMEM198Q66K66 360 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms