RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 SLC39A5Q6ZMH5 540 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 CEP97Q8IW35 865 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
UBE3A-220ENST00000630424 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 OR9A1PQ8NGU1 263 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 NSUN3Q9H649 340 aaKnown RBP13.76□□□□□ -0.21
UBE3A-220ENST00000630424 MBD2Q9UBB5 411 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 FZD4Q9ULV1 537 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 KIAA0100Q14667 2235 aaKnown RBP13.76□□□□□ -0.21
UBE3A-220ENST00000630424 A8MT66 165 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 H7BY64 318 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 AHSA1O95433 338 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 PTPRCAPQ14761 206 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 KIAA1161Q6NSJ0 714 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 PGBD2Q6P3X8 592 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 NATD1Q8N6N6 113 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 PRAP1Q96NZ9 151 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 TMEM248Q9NWD8 314 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 KNL1Q8NG31 2342 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 BCHEP06276 602 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 JUNDP17535 347 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 GSTT1P30711 240 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 SHMT2P34897 504 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 BMPR1AP36894 532 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 ETV3P41162 512 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 DLG1Q12959 904 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 SEMA3AQ14563 771 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 UPP1Q16831 310 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 TMCO2Q7Z6W1 182 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-220ENST00000630424 C14orf80Q86SX3 495 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 SYVN1Q86TM6 617 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 TNFAIP8L1Q8WVP5 186 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 SGCDQ92629 289 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 ZNF347Q96SE7 839 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 AMBNQ9NP70 447 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 IFT46Q9NQC8 304 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 GIN1Q9NXP7 522 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 WASF2Q9Y6W5 498 aa13.76□□□□□ -0.21
UBE3A-220ENST00000630424 GLOD5A6NK44 160 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 NPIPA5E9PKD4 350 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 PIRO00625 290 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 CDC123O75794 336 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 AHSGP02765 367 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 CBSLP0DN79 551 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 SDC2P34741 201 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 CBSP35520 551 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 GRIA2P42262 883 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 VSX2P58304 361 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ADAM8P78325 824 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 OLIG2Q13516 323 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 RBM20Q5T481 1227 aaKnown RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 NANOGNBQ7Z5D8 188 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 TDRPQ86YL5 185 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 TICAM1Q8IUC6 712 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 TXNDC5Q8NBS9 432 aaKnown RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 S100ZQ8WXG8 99 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 PTCHD1Q96NR3 888 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 PKP4Q99569 1192 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 C17orf62Q9BQA9 187 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 DKKL1Q9UK85 242 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 NPIPA1Q9UND3 350 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 TCRBV7S3A2A0A539 114 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 MUSKO15146 869 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 OR1I1O60431 355 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 HSD11B1P28845 292 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 GALNT2Q10471 571 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 SIAH1Q8IUQ4 282 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 BANPQ8N9N5 519 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 CST11Q9H112 138 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ING3Q9NXR8 418 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ACSL5Q9ULC5 683 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 MAN2B2Q9Y2E5 1009 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 PCDHGB7Q9Y5F8 929 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 SPIN1Q9Y657 262 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 A0A0X1KG70 313 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 CDH1P12830 882 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ENGP17813 658 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 DGKQP52824 942 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 LMAN2Q12907 356 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 ELAVL3Q14576 367 aaKnown RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 C1orf94Q6P1W5 598 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 DNM1P34Q6PK57 102 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 DNAJB8Q8NHS0 232 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 APOBEC3BQ9UH17 382 aaKnown RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 LGALS13Q9UHV8 139 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 GPR34Q9UPC5 381 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 VEGFDO43915 354 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 NR2C1P13056 603 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 GP1BBP13224 206 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 NR4A1P22736 598 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 PIK3CBP42338 1070 aa13.75□□□□□ -0.21
UBE3A-220ENST00000630424 EIF1AXP47813 144 aaKnown RBP13.75□□□□□ -0.21
UBE3A-220ENST00000630424 OR3A3P47888 321 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms