RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 PRAMEF13Q5VWM6 474 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 TMEM151BQ8IW70 566 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 EFCAB3Q8N7B9 438 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 GPATCH11Q8N954 259 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 PWWP2AQ96N64 755 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 PLAC1Q9HBJ0 212 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 FBXL4Q9UKA2 621 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 ADAMTS6Q9UKP5 1117 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 PDE10AQ9Y233 779 aa16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 RUVBL1Q9Y265 456 aaKnown RBP16.39■□□□□ 0.21
SPTAN1-214ENST00000628614 TNRC6AQ8NDV7 1962 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 EFCAB8A8MWE9 144 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 SOCS6O14544 535 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 HAT1O14929 419 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 CCND1P24385 295 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 IL2P60568 153 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 DSG2Q14126 1118 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 RBBP7Q16576 425 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 HKDC1Q2TB90 917 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 TUBB8Q3ZCM7 444 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 HECTD2Q5U5R9 776 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 FAM45BPQ6NSW5 357 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 JMJD6Q6NYC1 403 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 TRMT10BQ6PF06 316 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 SHISA6Q6ZSJ9 500 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 FAM45AQ8TCE6 357 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 CPT1CQ8TCG5 803 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 STT3BQ8TCJ2 826 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 PNPLA2Q96AD5 504 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 MIEF2Q96C03 454 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 KRT12Q99456 494 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 WDR83Q9BRX9 315 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 CRB3Q9BUF7 120 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 TRIM31Q9BZY9 425 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 SLAMF7Q9NQ25 335 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 TMEM184CQ9NVA4 438 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 CUEDC1Q9NWM3 386 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 SLC17A6Q9P2U8 582 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 HS3ST3B1Q9Y662 390 aa16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 SETXQ7Z333 2677 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-214ENST00000628614 IGLV3-12A0A075B6K2 115 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 H7BY64 318 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 ANXA5P08758 320 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 HIST1H2AGP0C0S8 130 aaPredicted RBP16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 ZGLP1P0C6A0 271 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 HIST1H2ADP20671 130 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 FDXRP22570 491 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 RPS15AP62244 130 aaKnown RBP16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 KLC1Q07866 573 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 NDUFA9Q16795 377 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 IRAK1BP1Q5VVH5 260 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 SLC6A19Q695T7 634 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 AGTRAPQ6RW13 159 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 ANKMY2Q8IV38 441 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 RBMXL3Q8N7X1 1067 aaKnown RBP16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 BBOF1Q8ND07 529 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 TM9SF4Q92544 642 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 HIST1H2AHQ96KK5 128 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 PRAP1Q96NZ9 151 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 HIST1H2AJQ99878 128 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 H2AFJQ9BTM1 129 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 MFRPQ9BY79 579 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 DRC3Q9H069 523 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 ZNF552Q9H707 407 aaPredicted RBP16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 SYNPO2LQ9H987 977 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 ZFATQ9P243 1243 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 VWA7Q9Y334 891 aa16.37■□□□□ 0.21
SPTAN1-214ENST00000628614 FANCGO15287 622 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 VPS4BO75351 444 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 TSPAN12O95859 305 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 ITGA3P26006 1051 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 VARSP26640 1264 aaKnown RBP16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 RPL21P46778 160 aaKnown RBP16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 AP1S2P56377 157 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 MGAT5Q09328 741 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 PDIA2Q13087 525 aaKnown RBP16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 NAE1Q13564 534 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 FAM53BQ14153 422 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 KIRREL2Q6UWL6 708 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 IGFL3Q6UXB1 125 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 MBOAT1Q6ZNC8 495 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 C17orf64Q86WR6 236 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 PLD3Q8IV08 490 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 ARHGEF39Q8N4T4 335 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 FBXO36Q8NEA4 188 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 THAP11Q96EK4 314 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 MMABQ96EY8 250 aaPredicted RBP16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 TRIM54Q9BYV2 358 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 C14orf105Q9NVL8 296 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 TRPC4Q9UBN4 977 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 C3orf18Q9UK00 162 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 VPS4AQ9UN37 437 aa16.36■□□□□ 0.21
SPTAN1-214ENST00000628614 KCNE1BA0A087WTH5 132 aa16.35■□□□□ 0.21
SPTAN1-214ENST00000628614 E7ESA3 106 aa16.35■□□□□ 0.21
SPTAN1-214ENST00000628614 MASP2O00187 686 aa16.35■□□□□ 0.21
SPTAN1-214ENST00000628614 TP73O15350 636 aa16.35■□□□□ 0.21
SPTAN1-214ENST00000628614 P2RX6O15547 441 aa16.35■□□□□ 0.21
SPTAN1-214ENST00000628614 ENO2P09104 434 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms