RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 HIF1AQ16665 826 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 HP1BP3Q5SSJ5 553 aaPredicted RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 RBM20Q5T481 1227 aaKnown RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 TEDDM1Q5T9Z0 273 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 IRAK1BP1Q5VVH5 260 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 GARNL3Q5VVW2 1013 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 KIRREL2Q6UWL6 708 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 IGFL3Q6UXB1 125 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 SHISA6Q6ZSJ9 500 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 RBMXL3Q8N7X1 1067 aaKnown RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 STT3BQ8TCJ2 826 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 TM9SF4Q92544 642 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 PNPLA2Q96AD5 504 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 MIEF2Q96C03 454 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 MVB12AQ96EY5 273 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 CFAP36Q96G28 342 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 HIST1H2AHQ96KK5 128 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 C10orf90Q96M02 699 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 PWWP2AQ96N64 755 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 PRAP1Q96NZ9 151 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 HIST1H2AJQ99878 128 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 H2AFJQ9BTM1 129 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 CRB3Q9BUF7 120 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 CCDC177Q9NQR7 707 aaPredicted RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 TMEM184CQ9NVA4 438 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 FBXL4Q9UKA2 621 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 ADAMTS6Q9UKP5 1117 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 CHMP2BQ9UQN3 213 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 PDE10AQ9Y233 779 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 RUVBL1Q9Y265 456 aaKnown RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 HS3ST3B1Q9Y662 390 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 IGLV3-12A0A075B6K2 115 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 HAT1O14929 419 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 TTI1O43156 1089 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 ANXA5P08758 320 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 ZGLP1P0C6A0 271 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 FBLP22087 321 aaKnown RBP10.32□□□□□ -0.76
SSBP4-215ENST00000625926 ITGA3P26006 1051 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 IL2P60568 153 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 KLC1Q07866 573 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
SSBP4-215ENST00000625926 DSG2Q14126 1118 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 FRG1Q14331 258 aaKnown RBP10.32□□□□□ -0.76
SSBP4-215ENST00000625926 INPP5JQ15735 1006 aaPredicted RBP10.32□□□□□ -0.76
SSBP4-215ENST00000625926 NDUFA9Q16795 377 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 HKDC1Q2TB90 917 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 TUBB8Q3ZCM7 444 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 HECTD2Q5U5R9 776 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 PRAMEF13Q5VWM6 474 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 SLC6A19Q695T7 634 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 AGTRAPQ6RW13 159 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 ZADH2Q8N4Q0 377 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 GPATCH11Q8N954 259 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 GALNT11Q8NCW6 608 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 OR11G2Q8NGC1 345 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 LINGO1Q96FE5 620 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 SNF8Q96H20 258 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 TRIM51Q9BSJ1 452 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 YIPF2Q9BWQ6 316 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 SYNPO2LQ9H987 977 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 PLAC1Q9HBJ0 212 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 CUEDC1Q9NWM3 386 aaPredicted RBP10.32□□□□□ -0.76
SSBP4-215ENST00000625926 TRPC4Q9UBN4 977 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 C3orf18Q9UK00 162 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 CORO1CQ9ULV4 474 aaPredicted RBP10.32□□□□□ -0.76
SSBP4-215ENST00000625926 PYCARDQ9ULZ3 195 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 VWA7Q9Y334 891 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 TEX264Q9Y6I9 313 aa10.32□□□□□ -0.76
SSBP4-215ENST00000625926 KCNE1BA0A087WTH5 132 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 PABPN1LA6NDY0 278 aaKnown RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 EFCAB8A8MWE9 144 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 NDC80O14777 642 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 SEC31AO94979 1220 aaKnown RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 FDXRP22570 491 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 CCND1P24385 295 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 SLC26A3P40879 764 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 AVPR1BP47901 424 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 RPS15AP62244 130 aaKnown RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 TBPL1P62380 186 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 PDIA2Q13087 525 aaKnown RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 NAE1Q13564 534 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 FAM53BQ14153 422 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 PLEKHN1Q494U1 663 aaPredicted RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 VWA2Q5GFL6 755 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 ATG9BQ674R7 924 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 STEAP4Q687X5 459 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 FAM45BPQ6NSW5 357 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 TRMT10BQ6PF06 316 aaKnown RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 C17orf64Q86WR6 236 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 PLD3Q8IV08 490 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 PRSS58Q8IYP2 241 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 FAM26EQ8N5C1 309 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 Q8NA96 180 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 BBOF1Q8ND07 529 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 FAM45AQ8TCE6 357 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
SSBP4-215ENST00000625926 THAP11Q96EK4 314 aa10.31□□□□□ -0.76
SSBP4-215ENST00000625926 MMABQ96EY8 250 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms