RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ANKRD20A1	Q5TYW2	823 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	ANKRD20A3	Q5VUR7	823 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	BRAT1	Q6PJG6	821 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	CREB3L2	Q70SY1	520 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	TUSC5	Q8IXB3	177 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	PM20D2	Q8IYS1	436 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	RBMXL3	Q8N7X1	1067 aa	Known RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	MGARP	Q8TDB4	240 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	PPP4R1	Q8TF05	950 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	FRAT1	Q92837	279 aa	Predicted RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	SPSB1	Q96BD6	273 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	GUCD1	Q96NT3	240 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	INPP5K	Q9BT40	448 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	TM6SF1	Q9BZW5	370 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	CHCHD3	Q9NX63	227 aa	Known RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	ERAP1	Q9NZ08	941 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF224	Q9NZL3	707 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	RCC2	Q9P258	522 aa	Known RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	ARMCX3	Q9UH62	379 aa	Predicted RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	SIX4	Q9UIU6	781 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	FBXL2	Q9UKC9	423 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	DDX49	Q9Y6V7	483 aa	Known RBP	5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	MCM3AP	O60318	1980 aa		5.44	□□□□□ -1.54
NRXN1-223	ENST00000625891	GBF1	Q92538	1859 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	PLXNA1	Q9UIW2	1896 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	MYH8	P13535	1937 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	FAM90A26	D6RGX4	464 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF587B	E7ETH6	402 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891		J3QR06	171 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	CLDN4	O14493	209 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	CLIC2	O15247	247 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	PRKAB2	O43741	272 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	MED24	O75448	989 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	KCNK5	O95279	499 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	PMS2P2	O95744	297 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	T-ENOL	P0DO92	83 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	ADRA2C	P18825	462 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	S1PR1	P21453	382 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	SOAT1	P35610	550 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	ASCL1	P50553	236 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	BACE1	P56817	501 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	TAS2R38	P59533	333 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	UGCG	Q16739	394 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	SHE	Q5VZ18	495 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	FAM91A1	Q658Y4	838 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	FAM122C	Q6P4D5	195 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	CCNI2	Q6ZMN8	369 aa	Predicted RBP	5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZBTB49	Q6ZSB9	765 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF534	Q76KX8	674 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	C16orf82	Q7Z2V1	217 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	GPR142	Q7Z601	462 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	GPR180	Q86V85	440 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	HOOK3	Q86VS8	718 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	KLHL7	Q8IXQ5	586 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	ZNF595	Q8IYB9	648 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	NDUFAF2	Q8N183	169 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	DEFB123	Q8N688	67 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	OR8H1	Q8NGG4	311 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	OR5R1	Q8NH85	324 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	HMGCLL1	Q8TB92	370 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	NUDCD2	Q8WVJ2	157 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	EXOC4	Q96A65	974 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	MTBP	Q96DY7	904 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	DYNLL2	Q96FJ2	89 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	THOC3	Q96J01	351 aa	Known RBP	5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	OR1F2P	Q96R84	312 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	OR6C1	Q96RD1	312 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	SLC22A12	Q96S37	553 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	PCYT2	Q99447	389 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	COQ3	Q9NZJ6	369 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	VPS18	Q9P253	973 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	CACNG4	Q9UBN1	327 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	LOXL2	Q9Y4K0	774 aa		5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	COL2A1	P02458	1487 aa	Predicted RBP	5.43	□□□□□ -1.54
NRXN1-223	ENST00000625891	GTPBP10	A4D1E9	387 aa	Known RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891		A4D1N5	150 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	DDX39A	O00148	427 aa	Known RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	SLC30A4	O14863	429 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	ANKRD28	O15084	1053 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	PAPSS2	O95340	614 aa	Predicted RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	PNP	P00491	289 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	DAO	P14920	347 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	KCNA5	P22460	613 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	HOXD10	P28358	340 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	SLC9A3	P48764	834 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	PEX5	P50542	639 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	STX1B	P61266	288 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	COASY	Q13057	564 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	SMC1A	Q14683	1233 aa	Known RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	FUT11	Q495W5	492 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	KCNT1	Q5JUK3	1230 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	C9orf57	Q5W0N0	161 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	C18orf63	Q68DL7	685 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	NADSYN1	Q6IA69	706 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	SATL1	Q86VE3	508 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	C1orf87	Q8N0U7	546 aa		5.42	□□□□□ -1.54
NRXN1-223	ENST00000625891	SLC5A8	Q8N695	610 aa		5.42	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms