RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 VPS50Q96JG6 964 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 ADI1Q9BV57 179 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 PLA2G2FQ9BZM2 168 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 REXO4Q9GZR2 422 aaKnown RBP19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 EPB41L1Q9H4G0 881 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 LIMD1Q9UGP4 676 aa19.05■□□□□ 0.64
PCDHB11-202ENST00000624887 PLOD2O00469 737 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 ETHE1O95571 254 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 RETP07949 1114 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 ABHD18Q0P651 414 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 DUOXA1Q1HG43 343 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 ADNP2Q6IQ32 1131 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 MED27Q6P2C8 311 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 TMPRSS11BQ86T26 416 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 OR7A2PQ8NGA2 310 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 STARD8Q92502 1023 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 REPS1Q96D71 796 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 ERLEC1Q96DZ1 483 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 CARS2Q9HA77 564 aaKnown RBP19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 NTN4Q9HB63 628 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 PAPOLBQ9NRJ5 636 aaKnown RBP19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 NDUFA13Q9P0J0 144 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 DOCK8Q8NF50 2099 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 MYOCOSA0A1B0GUC4 107 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 SMIM31A0A1B0GVY4 71 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 RFXAPO00287 272 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 UPK1AO00322 258 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 SCN2BO60939 215 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 PCNAP12004 261 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 DRD3P35462 400 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 WNT3P56703 355 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 RAE1P78406 368 aaKnown RBP19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 TAP2Q03519 686 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 SLC36A3Q495N2 470 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 ENPP6Q6UWR7 440 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 SATL1Q86VE3 508 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 YAF2Q8IY57 180 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 LRRC56Q8IYG6 542 aaPredicted RBP19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 C10orf111Q8N326 155 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM86B1Q8N7N1 296 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 CHTF18Q8WVB6 975 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM162AQ96A26 154 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 REXO5Q96IC2 774 aaKnown RBP19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 ZDHHC5Q9C0B5 715 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 OLAHQ9NV23 265 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM120CQ9NX05 1096 aaKnown RBP19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 DYRK1BQ9Y463 629 aa19.04■□□□□ 0.64
PCDHB11-202ENST00000624887 CREG1O75629 220 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 H6PDO95479 791 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 COX7A2P14406 83 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 ZNF23P17027 643 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 MYF6P23409 242 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 RPS9P46781 194 aaKnown RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 STARD3Q14849 445 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 SPIN4Q56A73 249 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 C10orf62Q5T681 223 aaPredicted RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 PNCKQ6P2M8 343 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 UNC5DQ6UXZ4 953 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM83HQ6ZRV2 1179 aaPredicted RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 C1orf52Q8N6N3 182 aaKnown RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 FBXO30Q8TB52 745 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 POP5Q969H6 163 aaKnown RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 MRPL38Q96DV4 380 aaKnown RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 EFCAB11Q9BUY7 163 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 OR52A5Q9H2C5 316 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 EHD1Q9H4M9 534 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 DCAF13Q9NV06 445 aaKnown RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 SMPD3Q9NY59 655 aaPredicted RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 TMEM98Q9Y2Y6 226 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 PCYT1BQ9Y5K3 369 aaPredicted RBP19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 PCM1Q15154 2024 aa19.03■□□□□ 0.64
PCDHB11-202ENST00000624887 C1GALT1C1LP0DN25 315 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 ASMTP46597 345 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 SF1Q15637 639 aaKnown RBP19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 NKG7Q16617 165 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 CATSPEREQ5SY80 951 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 HEATR4Q86WZ0 1026 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 FAM47BQ8NA70 645 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 PANX1Q96RD7 426 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 CD320Q9NPF0 282 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 MAPRE3Q9UPY8 281 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 SH2B3Q9UQQ2 575 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 MYRFQ9Y2G1 1151 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 STON1Q9Y6Q2 735 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 H3BNH8 94 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 FOXE1O00358 373 aaPredicted RBP19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 FPGTO14772 594 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 IL1RNP18510 177 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 RPS13P62277 151 aaKnown RBP19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 RPA4Q13156 261 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 PON2Q15165 354 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 THEMIS2Q5TEJ8 643 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 SYCE2Q6PIF2 218 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 DOK6Q6PKX4 331 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 SERPINA11Q86U17 422 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 LAS2Q8IYD9 372 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 MAGEE2Q8TD90 523 aaPredicted RBP19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 SLC47A1Q96FL8 570 aa19.02■□□□□ 0.64
PCDHB11-202ENST00000624887 IGLON5A6NGN9 336 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 EVPLLA8MZ36 301 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms